Cercospora beticola: CB0940_01265
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Entry
CB0940_01265 CDS
T09388
Name
(RefSeq) Transcription elongation factor spt5
KO
K15172
transcription elongation factor SPT5
Organism
cbet
Cercospora beticola
Pathway
cbet03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cbet00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
CB0940_01265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbet03021
]
CB0940_01265
03019 Messenger RNA biogenesis [BR:
cbet03019
]
CB0940_01265
Transcription machinery [BR:
cbet03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
CB0940_01265
RNA polymerase I system
CB0940_01265
Messenger RNA biogenesis [BR:
cbet03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
CB0940_01265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5_N
KOWx_SPT5
Spt5-NGN
KOW5_SPT5
KOW4_SPT5
CTD
KOW2_Spt5
KOW1_SPT5
KOW
TopoV_HHH
Motif
Other DBs
NCBI-GeneID:
35425075
NCBI-ProteinID:
XP_023459541
LinkDB
All DBs
Position
1:complement(3260887..3264506)
Genome browser
AA seq
1001 aa
AA seq
DB search
MSNFLDQQFPDEEEEDDFNPGQHVASDDEDDAKPQVDEDEDERPAKQRAAAGADDDELKE
EAGDEDGAEDAKEGEEDEEEEEEDEEEEEDEDDEDDVGRPTKRRKQRRNQFIDVEAEVDE
DDEEEPEEEDDLPGEEMHPDDLQELPPGADRDDRMHRELDRKREQQEAMDVEETAARLKE
RYGRQNRAAGSGSGIVPQRLLMPNADDPRIWFLKCRPGKEREIIFAMQSRIVERQRSREP
VQIFSAFERSGTGAMMGKIYVEARRVDDVTAAFDGVTHVFMGTKPQLIPIEEMPALLRVK
KSKQLEPGMYVRPRRGLYAGDLAMVDEVEPNGTEVQLKLIPRLDYGQTEDANAAAAVMEP
DGQGGMKRKRVAQPFKQRPPARLFSESEAKRKHGRYLSQKGGLSGNSWTYQGKEYIDGFL
VESFKIGHLQTDDVNPTLEEVTKFAAATEDGTENLDLAALAATLKAGVGADYLPGDKVEI
FRGEQKGVTGRATEVYNEVIKIQVDSGALAGKMIEAPIKDLRKLFKEGDHVKVIGGSKYQ
DEVGMVVRLRDDRITILTDSTQQEITVFAKDLREATDSGGVVGASKYDLFDLVQLDASTV
GCVVKVDRESLRVLDQLGSVRSLLPTAISNKIEKRREGAPATDRNGNEIKPEDTIKDYGG
EAREGKVLHIHRGFVFAQSRESRENAGVFVARSNTVVTVAAKGGRVGPDLTKMNQALKGP
NGGAAPPMPPPVQRGRDRLIGRTVKIKVGPMKAMIGIVKESSDAGALVELHSKNKKVTMP
KEKLAVIDATSGQVICSDASTFGGFGGPRGAPGRGPPIGGATPGRPGYGAPPMASGGRTP
AYAAGAGGRTPAWKADGGRTPAWQASGGQTAYGGGGGMTAYGGQTSYGGATSYGGGSVWG
GGAQSAWNPNAGGGRTPAYVANSGGKTPAYSGSGLEAPTPGAYSAPTPGAGYGDQPTPGA
YRGAAYNTPANYSTPGGFPETPAPYSAETPAASHDDGPRYE
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacttccttgaccagcagtttcccgacgaggaggaagaagacgacttcaatcca
ggtcaacacgtggcgtcagacgacgaagacgatgcaaaaccgcaggtcgacgaggatgag
gatgagaggcctgccaaacagcgagcagccgctggcgccgacgatgatgaactaaaggag
gaggccggcgacgaagatggcgctgaagacgcgaaagaaggcgaagaagatgaggaggaa
gaagaggaagacgaagaagaggaagaggacgaggatgatgaagacgatgtcggccggccc
accaagcgtcgaaaacagagacgaaatcagttcattgatgtcgaagccgaagtcgatgag
gacgatgaagaggagcccgaggaagaagatgacctccctggcgaagaaatgcacccggat
gatctccaggagctgcctcctggtgccgacagggatgatcgcatgcacagagagctcgat
cgcaagcgtgaacagcaggaagccatggacgtcgaggagaccgcagcgcgattgaaagag
agatatggacgacagaatcgtgccgcaggctcgggatctggaatagtgccccagcgtctg
ctcatgccaaatgcagacgatccacgaatttggttcttgaagtgtcgcccagggaaagag
cgtgaaatcatctttgcgatgcaaagtcgcatcgtggagcgccagcgatctcgagagcca
gtgcaaatcttttccgcttttgagcgctccggcaccggtgctatgatgggcaaaatctac
gtcgaagcgcgtcgagtggacgatgtcactgcggcctttgatggcgttactcatgtcttc
atgggcaccaaaccgcagctcatcccaattgaggaaatgcccgctctcctgagggtcaag
aaaagcaagcagctggagcccgggatgtacgtgcgtcctagacggggtctgtacgccggc
gatcttgccatggtggatgaagttgagcccaacggaaccgaagtacagctgaagctcatt
cctcgccttgactacggccagaccgaggatgccaatgctgctgcagccgtcatggagcct
gatgggcagggaggcatgaagcggaagcgtgtggcacagccattcaagcagagacccccc
gcgcgactattcagcgagagcgaggccaagaggaagcatggccgatacttgtcacaaaag
ggaggtctgagtggaaacagctggacctatcagggaaaagagtatatcgatggtttcctg
gtcgaaagtttcaagattggccatctgcagacagatgatgtcaatccgaccctcgaagaa
gtcaccaaattcgcggcagcgacagaagatggcacggagaatctggatttggctgctttg
gctgccactctcaaggctggtgtgggcgcagactacttgcctggcgacaaggtagagatc
ttccgtggcgagcaaaaaggtgtgaccggtcgggcgacggaagtctacaacgaagttatc
aagattcaggtggactccggcgcgcttgcaggcaagatgattgaagccccaatcaaagat
ttgcgcaagctctttaaggagggagatcacgtcaaggtcattggtggcagcaaataccag
gacgaagtgggcatggttgtccgtctgcgcgatgatagaatcacaattcttacggacagc
acccagcaagagatcacagtcttcgccaaagatctgagagaggccaccgacagtggcggt
gttgtgggcgcatcgaaatacgatctgtttgatctagtgcaattggatgcatcaacagtt
ggctgcgtggtgaaggtggaccgcgagagtttgcgtgtgttggaccagctgggcagtgtg
cggtcattgctgcccactgcgatctccaacaagatcgagaagcgccgcgagggtgctcca
gccactgatcgcaacggaaatgagatcaagcctgaagacaccatcaaggactacggcggt
gaggcgcgtgaaggcaaggttctgcatatccaccgcggtttcgtctttgcgcaatcgcga
gagagcagagagaacgccggcgttttcgtggcgcgtagtaacaccgtggtcacagtggca
gcgaaaggtggccgcgtcggtcccgatttgacaaagatgaatcaagcgctcaaaggtcca
aatggaggtgcagctcctccaatgccacctcctgtgcagcggggacgtgatcgactcatc
ggacgcacagtcaaaatcaaggttggtcctatgaaagccatgattggtatcgtgaaggag
tcgagtgacgctggcgccctggtcgagctgcatagcaagaacaaaaaggtcactatgccc
aaggagaagctcgctgtcattgatgcgacatccggccaagttatatgctccgatgcgagc
acattcggcggctttggaggacctcgtggggcaccaggcagaggaccaccgatcggcggt
gcgactccaggccggcctggctatggagcacctccaatggcaagcggtggacggacgcca
gcatacgccgcgggagctggaggtcgcacgccagcctggaaggcggatggcggccgcact
cctgcttggcaagcctctggcggacagactgcttacggcggaggcggtggcatgacggct
tacggcgggcagaccagttacggcggagccacatcatacggaggtggctcggtgtgggga
ggcggagcacaatcagcgtggaatcctaatgcaggagggggtcggacgcctgcttatgtc
gccaattcaggcggaaagacacccgcatattctggctcaggtcttgaggcgccaacgcca
ggggcgtactccgctccaacccccggggcaggctatggcgatcagccgacgccaggagcc
tacagaggagctgcatataacactcccgccaactactcaacaccaggagggttccccgag
acaccggcgccgtacagtgcagaaactccagcggcatcacacgatgatgggccacggtac
gagtag
DBGET
integrated database retrieval system
