Cercospora beticola: CB0940_01515
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Entry
CB0940_01515 CDS
T09388
Name
(RefSeq) ATP-dependent RNA helicase SUB2
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
cbet
Cercospora beticola
Pathway
cbet03013
Nucleocytoplasmic transport
cbet03015
mRNA surveillance pathway
cbet03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cbet00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CB0940_01515
09122 Translation
03013 Nucleocytoplasmic transport
CB0940_01515
03015 mRNA surveillance pathway
CB0940_01515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbet03019
]
CB0940_01515
03041 Spliceosome [BR:
cbet03041
]
CB0940_01515
Enzymes [BR:
cbet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CB0940_01515
Messenger RNA biogenesis [BR:
cbet03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
CB0940_01515
Spliceosome [BR:
cbet03041
]
Complex C
Other components
EJC/TREX
CB0940_01515
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
CB0940_01515
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
ResIII
Motif
Other DBs
NCBI-GeneID:
35425325
NCBI-ProteinID:
XP_023458406
LinkDB
All DBs
Position
1:<3898147..>3899318
Genome browser
AA seq
232 aa
AA seq
DB search
MSGEEDLIDYSDEELQPTDGAAGATGATAASNGDAKKGDLTVSGAGADKGKGSYVGVHSQ
SFRDFLLKPELLKAITDCGFEHPSEVQQVCIPQAILGTDVLCQAKSGLGKTAVFVLSTLQ
QIEPVNGEVSVLVMCHTRELAFQIKNEYQRFSKYMPDVKTEVFYGGTDIKENEKLLANKS
THPHIIVATPGRLNALVREKKLRLGSVSRFVLDECDKMLDQIGIANRFPYYD
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcgaggaggatctcattgactactccgatgaggagcttcagcccaccgatggc
gctgcgggtgcgactggcgccactgccgcctcgaacggcgatgccaagaagggagacctg
acagtatctggagctggcgccgacaaaggcaagggcagttacgtgggtgtccactcgcaa
agtttccgcgatttcctcttgaagccggaacttctcaaggccatcacagactgcggtttc
gagcatccatcagaggtccaacaagtatgcattcctcaggccattctcgggacagatgtg
ctctgccaggccaaatctggtctcggaaagaccgcagtgttcgtcttgtcgactctgcag
cagattgagccagtcaacggcgaggtcagcgtcctggtcatgtgtcacacgcgtgaattg
gcctttcagatcaagaacgagtaccagcgcttcagcaagtacatgccagatgtgaagact
gaggtcttttatggtggtaccgacatcaaggagaacgagaagcttctcgcgaacaagtcc
acgcatccacacatcatcgtcgcaactccaggtcgactgaacgccctagttcgggagaag
aagttgcgtttgggaagtgtctcaagattcgtgctcgatgagtgcgataagatgctggat
cagattggtattgccaaccgctttccatattatgattga
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