Cercospora beticola: CB0940_01748
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Entry
CB0940_01748 CDS
T09388
Name
(RefSeq) RNA polymerase II transcription factor B subunit 3
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
cbet
Cercospora beticola
Pathway
cbet03022
Basal transcription factors
cbet03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cbet00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CB0940_01748
09124 Replication and repair
03420 Nucleotide excision repair
CB0940_01748
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbet03021
]
CB0940_01748
03400 DNA repair and recombination proteins [BR:
cbet03400
]
CB0940_01748
Transcription machinery [BR:
cbet03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CB0940_01748
DNA repair and recombination proteins [BR:
cbet03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CB0940_01748
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-C3HC4
zf-RING_2
zf-C3HC4_2
RING_XB3-XBAT31
zf-RING_5
zf-RING_16
TRAF3_RING
zf-RING_4
DUF3797
DDHD
Motif
Other DBs
NCBI-GeneID:
35425558
NCBI-ProteinID:
XP_023458110
LinkDB
All DBs
Position
1:complement(4525324..4526680)
Genome browser
AA seq
370 aa
AA seq
DB search
MSRLVHNSKPSPMGKADDGEICPVCKSSRYLNASLRFLVNPSCYHRMCESCVDRLFSHGP
QPCPIPGCRETLRKNRFRQQTFEDIQVEREVDIRRKVAAVFNRREDEFESLRDYNDYLND
VEDITFNLINRIDVEETERRFREYEMANQREIAENASLAEQESMSYSSLQKAEREVARQR
RETARREEADERREAQANKRDVLRRLENGQDPDSVAKEAQGATLKKRLNRQDAAARQQQL
QATSEVKTGRGAGGNGNTLIKGLKAKVKTEPDAPIDPFGGYNFGVKRYYSTQSKYVWDVL
QSTANDGKHGPGGYEVSVFTDRALCEAFSGLGCFIADECTEASKQDQNEQFAGTARAAAG
AADITMSDSI
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggctggtgcacaacagcaagccgtcgcccatgggcaaggcagacgacggcgag
atctgccccgtgtgcaagagcagtcgttaccttaatgccagcctgcgatttctcgtcaac
ccatcatgctaccaccgcatgtgcgagtcgtgtgtcgaccggctcttctcccatggacca
cagccgtgcccgattccaggatgccgcgagacattgcgcaagaatcgcttccgtcagcag
accttcgaggacatccaggtcgagcgcgaagtcgacattcggcgcaaggtggcggcagtc
ttcaaccgccgtgaggacgaattcgagagcttgcgcgactacaatgactacctgaacgac
gtggaagacatcaccttcaacctcatcaaccgcatcgacgtcgaggaaacggagcggcga
ttccgagagtacgaaatggcaaatcagagggagattgcagagaatgcgtctctggcagag
caggaaagcatgtcatattcttcactgcagaaagccgagcgcgaggtcgcgcgccagcgg
agagagactgcccggcgagaagaggcagacgagcggagggaagcacaggcgaacaagcgc
gacgtattgcgacgattggagaacgggcaggacccagactcggtcgcgaaagaagctcaa
ggtgcgacactgaagaaacgattgaaccggcaagacgcagcagcgagacaacagcagctg
caggccacttcagaagtgaagacaggacgcggcgctggtggtaatggtaacaccctgatc
aaaggactcaaagcaaaagtcaagacagaacccgacgctccgatcgatccattcggtggc
tacaatttcggggtcaagaggtattattccacacagagcaagtacgtctgggacgtcttg
caaagtactgcgaatgatggcaagcatgggcctggtggatacgaagtttctgtattcact
gatcgtgctctatgcgaagccttcagtggacttggctgcttcatcgcggacgaatgcact
gaggctagcaagcaggatcagaatgagcaattcgctggcacggctagggcagcggcggga
gctgcggacatcacaatgagcgattctatatga
DBGET
integrated database retrieval system
