Cercospora beticola: CB0940_02356
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Entry
CB0940_02356 CDS
T09388
Name
(RefSeq) U3 small nucleolar RNA-associated protein 10
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
cbet
Cercospora beticola
Pathway
cbet03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cbet00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CB0940_02356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cbet03009
]
CB0940_02356
Ribosome biogenesis [BR:
cbet03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CB0940_02356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BP28CT
U3snoRNP10
HEAT_HEATR1
Motif
Other DBs
NCBI-GeneID:
35426166
NCBI-ProteinID:
XP_023457224
LinkDB
All DBs
Position
3:complement(305369..310806)
Genome browser
AA seq
1769 aa
AA seq
DB search
MATALQQQLAAIAANSTHQLDLKAQKARHSKSLLFEPRDAATQKFDTIYQICLEGFEELC
ELDKRFRPYARNLFSEQSKTEDRTNMTVQENEELDTVIVRFLGLLGGRLLLKPAMKAMEW
LVRRFRVQEYNTEAVLFTFLPYHASHIFPTLLSILPEQLPPNFRFLHPYVTSLQNPPRHA
IVAAASNQSALFSAFSQYMLGVAKLKYQQPMLLGFWASITAQAVNNMIDASRSGRKEVRR
QKEEDMLMKVLPILRGAFAIQGVPELYLGSCMIMTIMATKADLSEATLNALMDAVASGWT
EQTIEDGIICLSVLAEEKEQLTLSKGTVRALLQQEEALEILDRVGGNYRVDNLLTGVALG
ALDLIKGTSDARAMQLLPAILSSQSLPESHAVYILESTLRAIADLPSAESDANSRRDLIT
IASRASEEEHGARQLQLAAQRANINLAELDGSLTLRLTDGDETRDEERDQMLLDSQFDME
AIETKALFEDLPKIDSTNFSFLDEAHSAIFADYCSAFQAALPSKQDVATFFSLPSLARKS
LTQQPTMLTFLARTWTSDVPASVRVKALQVTRELLEQVRKSGQSVDLQLLIPYVISGLSD
SVKAARSAAASTCLALHSTYDVKKLKESTVWAKPSAYGPAGFNVQWLSSADAHKFIADGI
VAVLEDCVIDQNYILQHLADTINGATKAERKELKQALRASVYSCLASHVVATPEPQVKLR
LLDVTAKVGKVAGSNTRVQVLLPYAKQALGDKSSSPALCKALVSNMTHRSTEELQFSKDL
AGGQYGADRAQYAFARLSQLWRNMKQNSQTDVADWLLDLSLGGEGSTASEELQAQAVETL
RNLTLPSEILVHLVESLPSVAQLQGHPTPAKKQRTSRTSDVSKLASIDKSKLDAAIRRIT
LVLEIVEGSKAEQHPQLLKGLFYLLSELQHYKTLLDSELVYLQGLLINNLLSVVKGLKNA
SNKDVDRSVVRADLIVDCVRTTSSTQVHQSALLLMSSLASWAPDLVLHSVMPLFTFMGST
ILKQGDDYSAHVTDQTVARIIPPLAASLKKKGRDLLTGSAELLLSFTAAFEHIPLHRRAG
LFHNLVQTLGPEESLFAIMAMLIERYPEDSTVLPFVSDLMSHFPSTVELGAIRRYLDLVF
DTLKSKRTLSDVILGYGEKNADQAKASTIVLMEGLASTLSREALRRKLAKELKLGAETAS
SLQNTYSVILEKTMQLGLQVTKSEDLSDSASNVLTALLGLMPTSDFIESSAMLMQTGSDE
IRQQVFWSLEQRVETARRGDATLQKVFIEVLPNCALFVASSQPIATRTAAITCIDRIADK
FGKTDRSSVMSVAQEIAGDAALGEKDDDLRRISILCLASMVEVLGDEMIPILPKTFDTVL
RYMHETLHEGDGEANMELLVAGFSFAMAVLDHIPWMLSGKYLDRLLVLAAESDADTVQRF
IALAARKVSANDFLGAIERTWAEVVKIATEDDVDAARIHVTALNTAVQHHTKATIAQNAQ
LLFKILLLAFDLRRQLADEDDEDLSSLFDMVNDTTMQAVLKLNDNTFRPFFIRLTEWAFA
GLPKTDHKGALLRTSSLYSFSLVLFEQLKSLVTSYASFLLENAASLLTTLSTGDEQELEL
LELVLDTLTSNFSNDQDGFWQSPAHFDAIAKPLVSRLGLAATYDVNSHVIPAITELAACV
SSQDHHKTMNGLIMTFMRNENSAVRLAAIKAERSLTERLHIDWLNSLPEMLPFISELQED
DEGVVERECLRWIAQIEEVTGESLEGMLQ
NT seq
5310 nt
NT seq
+upstream
nt +downstream
nt
atggcaacggctctgcagcagcaattggccgccattgcggccaacagcacacaccagctc
gacctgaaagcgcaaaaggcgcgccacagtaaatcgctactgttcgaacctcgagatgcc
gctacccaaaaattcgataccatctaccaaatatgtctggaaggattcgaggagttatgc
gagttggacaagcgattcagaccgtatgcgcggaatctgttcagcgagcagagtaagacg
gaggatcggacgaatatgacggtgcaagagaatgaagagctggatacggttattgtgcgg
tttctggggctgcttggaggacgattactgctgaagccggcgatgaaggccatggaatgg
ctcgtcagaaggttccgagtgcaagagtacaacacagaggccgtgctgttcacgtttctg
ccgtaccacgcttcgcatattttcccgaccctcctctcgatcttgcccgaacagctgccg
ccgaatttccgattcttgcatccgtatgtcacatcattgcagaatccgcctcgtcacgcc
atcgtggctgctgcgagtaaccagtctgctctgttctccgcgttcagccagtatatgctg
ggcgttgcgaagctcaagtaccagcagccaatgcttttgggattctgggccagcattacc
gcacaggctgtcaacaatatgatcgatgcgtcccgttccggaaggaaggaagttcgcagg
cagaaagaggaggatatgctgatgaaagtgcttcccatccttcgcggagcattcgccatt
cagggtgtgccggagctgtatttgggaagttgcatgatcatgaccatcatggcaaccaag
gctgacctcagtgaggctaccttgaatgccctcatggacgcagtggcgagcggttggacc
gagcagacaattgaggacggcatcatctgtctctcggtgcttgcagaggaaaaggaacag
ttgactctgtccaaaggcacagtccgtgcacttctccagcaggaagaggcactggagatt
ctcgatcgagtgggtggaaactacagagtggataatctgctcaccggagttgcattgggt
gctctggacctgatcaagggcacgtcagacgcacgcgcgatgcagctgctgccagcaatt
ctctcttcacaatcgttacccgagtcacacgccgtgtatatcttggagagcacgcttcgt
gcgattgccgatctcccatcggccgaatctgatgccaatagccgacgcgatctcatcact
attgcttctcgtgcctccgaggaggagcacggggcgcggcaattgcaattggcggctcag
agagcaaatatcaatctcgccgaactggacggaagcctcaccctgagattgacggacggg
gacgagactcgggacgaagagagagatcagatgttgctcgactcacaattcgatatggaa
gccatcgagaccaaagcattgtttgaagaccttcccaagatcgattccaccaacttctca
ttcctggacgaagcacattcagccatcttcgcagactactgttcagcttttcaggcagca
ttgccttcgaaacaggatgtggccaccttcttcagcctgccctctctcgctcgcaagagc
ctgacacaacagccgaccatgctcacattccttgctcgtacatggacgagtgatgttccc
gcgtcagtgcgagtcaaagcgctgcaagtcacccgagagctgctggagcaggttcgcaaa
agtggtcaatcagtcgacttgcaattgctgattccgtatgttatctccggtcttagcgac
tctgtcaaggctgcgagaagcgctgctgcttccacctgtcttgctctgcacagcacatac
gatgtcaagaagctcaaggaatcgacagtgtgggcgaaaccctctgcttacggcccggct
ggattcaatgtgcagtggttgtcctccgccgatgcgcacaaattcattgctgatggcatc
gttgcggtcctcgaagactgtgttatcgatcaaaattatatcctccagcacttggcagat
acgatcaacggcgccacgaaggccgagcgcaaggagttgaaacaggccctgcgcgcaagt
gtttattcttgccttgcctcgcatgtagttgcgacccctgagccgcaagtaaaactccgc
cttctggacgtcacggccaaagtcggcaaggtcgctggatccaacacccgcgttcaagta
ctgctgccatatgcaaagcaggcattgggcgacaagtcatcgagcccagccctctgcaag
gccttggtcagcaacatgacccatcgcagtaccgaggaactacaattttcgaaggatctt
gctggcggacaatacggcgctgaccgtgcgcagtatgcatttgctcgtctgagccaactg
tggcgcaacatgaagcagaattcgcaaactgacgtcgcagactggctgctggatctatct
cttggcggcgaaggctcaacggcttctgaagaacttcaggcacaagcagtggaaacactg
cgtaacttgacgctgcccagtgaaatactggtgcatctggtggagagtctacccagtgtt
gcgcaactgcaaggccatccgactcccgccaaaaagcaacgaacaagtcggacttctgac
gtttcgaagctcgctagcatcgacaaatccaaacttgatgcagcgattcgccggatcact
cttgtgcttgaaatcgtagaggggtcaaaggctgaacagcatccacagttgctgaagggt
ctcttttaccttctgagcgagttgcagcactacaagacgctactggactccgagctggtt
tacctgcaaggacttctgatcaacaacctgctctctgtcgtgaagggattgaagaacgcg
tcgaacaaggacgtggaccgctcagttgtccgcgctgatctcatcgttgactgtgtgcga
accacctcaagcacacaagtccatcagtctgcgttacttctcatgtcctctctggcttcc
tgggcaccagatctcgtccttcacagcgtcatgccattgttcacgtttatgggctcaaca
atcttgaagcagggagacgattacagcgctcatgtcaccgaccagacagtggcgcgcatc
attcctcctctggcggcatccctcaagaagaagggccgagatttgctcacaggatctgct
gagttgctcctgagcttcaccgcagcctttgagcacatcccgcttcatcgacgagcagga
ctattccacaatctggtccagaccctcggcccagaagagtcccttttcgcgatcatggct
atgcttattgagcgttatccggaagacagcactgtgttacctttcgtgtcagacctgatg
agccatttcccgtcgaccgtcgagctcggtgcgatcagaagatacctggatctcgtcttc
gacaccctgaaatcgaagagaacattgtccgatgttatccttggctatggtgagaagaat
gctgatcaagccaaggcttcgacaattgtgctcatggaaggtcttgcaagcacactctca
cgtgaagcacttcgccgaaagctagccaaggaactgaaactgggcgcagaaaccgcttcg
tcactgcaaaacacatactcggtaattctggagaagaccatgcagcttggtctgcaagtc
accaagtctgaggatctttcggacagcgcatctaatgttctgactgcactgctcggtctg
atgccaacgagcgacttcatcgagtccagtgctatgctcatgcaaacaggctctgacgag
attcgccagcaggtcttctggtctttggaacagcgtgtcgaaacggcaagacgcggcgat
gcaacgttgcaaaaggtcttcatcgaggttctaccgaattgtgctctgttcgtcgcgtcc
agtcagccaattgcaactaggaccgctgccatcacttgcattgatcggatcgcagacaag
tttggcaagacagatcgctcgtctgtcatgtctgttgcgcaagagattgcaggcgatgcg
gcactcggcgagaaagatgatgatcttcgccgaatatccattttgtgcttggcgagcatg
gtggaggtgttgggagacgagatgatccccattctgccaaagacgttcgacaccgtgcta
cgctacatgcacgaaaccttgcatgaaggtgacggcgaggctaacatggaattgcttgtg
gccggcttcagctttgccatggctgttctcgatcacattccatggatgctgtccgggaag
tacttggaccgccttcttgtacttgccgctgagagtgatgcggacactgttcagcgattc
attgcgctcgcggcaagaaaggtctcggccaacgatttcctcggcgccattgagcgtacc
tgggcagaagttgttaagatcgcaaccgaagatgatgtcgatgcagctcgcattcatgtt
accgctctcaacactgccgtgcaacatcacaccaaggcgactattgcacagaatgcgcaa
ctgctcttcaagatccttcttcttgcgttcgatctgcggcgacaacttgctgacgaagat
gacgaggatttgtcgtcgctcttcgatatggtcaacgacacgaccatgcaagctgtgctt
aagcttaacgacaacacattccggccattcttcattcgtctcaccgagtgggccttcgca
ggacttccaaagaccgaccataagggtgctctcctccgcacctccagcctttacagcttc
tctctcgtcctcttcgagcaactcaagagcctggtcacaagctatgccagcttcttgctt
gagaatgccgcatctctgctcacgacactgtcaactggagatgaacaggagctggagctt
ctcgaacttgtcctcgacactctgacatcgaacttctccaacgaccaagacggtttctgg
caatctcccgcacacttcgatgcgatcgccaagcctctcgtctcccgcctcggtctcgca
gccacatacgatgtcaattcgcacgttattcccgccattacggagcttgctgcatgtgtt
tccagtcaagatcatcacaagaccatgaacgggctgatcatgacttttatgcggaatgag
aatagtgctgtcaggctggcggctatcaaggcggagagatctttgactgagagattgcat
attgattggttgaactctttgccggagatgttgccatttattagtgagttgcaggaggac
gatgagggagttgtggagagggagtgtctgagatggattgcgcagattgaggaggttact
ggggagtcgttggaggggatgttgcagtag
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integrated database retrieval system
