Cercospora beticola: CB0940_02531
Help
Entry
CB0940_02531 CDS
T09388
Name
(RefSeq) rRNA biogenesis protein rrp5
KO
K14792
rRNA biogenesis protein RRP5
Organism
cbet
Cercospora beticola
Brite
KEGG Orthology (KO) [BR:
cbet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cbet03009
]
CB0940_02531
Ribosome biogenesis [BR:
cbet03009
]
Eukaryotic type
90S particles
Other 90S particles
CB0940_02531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
OB_RRP5_4th
Spt6_S1
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
HAT_PRP39_C
Suf
HAT_PRP39_N
RNase_II_C_S1
TPR_19
NRDE-2
ProQ_C
Motif
Other DBs
NCBI-GeneID:
35426341
NCBI-ProteinID:
XP_023457700
LinkDB
All DBs
Position
3:754497..760281
Genome browser
AA seq
1849 aa
AA seq
DB search
MAPVKRKAVTDERPSKKAKPADVKEVKESASKPDRTESRKEEKRNAKEKKERLARSGGEP
GEKKAPVKSILQQEETAFPRGGGSVLTPIERKQIEAQAERDVLFEQETGQKAGAEDDDGE
LFDEAESAPASKKKRKAERKSDGVSKVDGSGIKISGLSYKSLAVGSVVLGRVTAITGRDI
ALALPNNLTGYVPITSVSERLTTRIERLLDDAKSGADDSDEDEDIDLKQLFHIGQWLRAV
VTTTGTDPAEGKSKKHIELSLDPSAVNGGLPEESVVVNSTVQATVRSVEDHGLVMDLGLA
DDSVKGFVSKKELGSAYTLEKIQDGQVMLCLVTGKGSNGKVLKISPDPSRMSLALGDKKL
PTVNDAPSVDAFLPGTAVTVLITESGVQGIAGKIMGMLDVTADVIHAQVIGLEDKDVSKK
YKVGSKVSARIIYAIPGDDGARRVGISLLAHTLSLVPPPGRLPDIATKSLKAQAAELEQM
LPMSSIVEKAKITQVSPNKGLYLRISTKVGREERVSTAFAHISQISDKRIDSLSSTSGSY
TIDSAHKVRIIGYSPVDNMYYVSLKQSVLDQAFLRLEDLIVGDLVNGTVDKIILGGTTGV
TGILVKLSDNITGLVPEQHISDAQLKNPERKYREGFPVKARILSVDTEKRHVRLTLKKQL
VDDVDGKIWKAYDDLKPGMESKGTIIKLHPNGAVVQFYGPVRAWLPVAEMSETFIERPEQ
HFRLGQTIRVKIVSVSPEAQEMKVTCKDSVAFDEDQEQAWNNISGGQLVSGTVTEKSSET
ISVDLESGLKGIIRVMHLVDGSLAKAEKEAKRIRVGQKLQNLLVLDKQDRSQTVLLSNKP
SLVEDAKSDKLITTFSDIAQGVKVRGFVRNTTADAVYVEFANGIVGLLPKSQILAESLSK
PEFGMRKDQTLNLWVLDMDHTGKRFRLTMREQAASADQTSSSAPATLDALSKPIDSSLKS
MSDLEPGRITKARIASVRATQINVRLADNVQGRVDVSEVFDSWEEIANKAAPLQNFKQND
LIDVKVLGIHDARNHRFLPFSHRQGKTPVFELSAKKSRVEKDDKSLLELDSVKAGSSHLA
FVNNHAENCVWVNLSPNVRGRVALMDLSNDVGQLQNVENRFRVGCALRVKVKAADISTGR
LDLTARQDEASAALTLKDLSPGMVLPARVIKSTERAVTVELAKDLICHVPLVELSDDYDE
VNLAQYNKNDIVRVCVIGVDTPNKRAFVSLRPSKVLSSSLPVKDHHISNVSQVKAGDIVR
GFVKKVADKGVFISLGADVDALVRIADLSDQFVKEWRSIFEVDQLVKGRVLSVDTESRQI
QLSLKPSHVGGHYEPPLGITDIEVGMNVTGRVRKVEDFGAFIDIDNTQPRLSGLCHRSEV
AARRIEDVRKLYSAGDVVKAKVLSVDVENRKISLGLKASYFANERDEVDEDEEEESENED
VDMDGGVELEDDSEGGIDIDLADVQDADSDDEDAAEDAMDVDEEPAAASGGLKTTGFDWA
GDSLDAETNGAAYESEPETMTVKKKKRKSEIKEDLTGDLDKNGPQSNSDFERRLLGEPNN
SSLWIEYMAFQLRLSEVQQARNIAERALRTINIRETDEKANIWIAWINLEVEYGDDETVE
GVFKNACQVQDPLEMHEKLASIYIDSGKHNEADGIFERVVANKNFRASPDVWLNYATFLL
NNLRKPERAHALLSKALQSVPVSEHRLLTAKFAALEFRTAAGDPERGRTMFENILDEYPK
WSSGWDMWVDIERSRIAHCESDEAKAEAIEKTRALFERTIKVPMKKRRAKFVFKKWLEFE
NKEGAMPVGGKKGKKGNAGGSQAERVTVLAREYVQKLEEKKGGDGDDEE
NT seq
5550 nt
NT seq
+upstream
nt +downstream
nt
atggcacccgtcaaaagaaaggccgtcaccgatgagcggccaagcaaaaaggcaaagccg
gcagacgtgaaagaagtgaaagagagcgccagcaaaccggacaggaccgagtcgcggaag
gaagagaagcggaatgctaaggagaaaaaagagcgactggcacgcagtggcggcgagcct
ggagaaaagaaggcacctgtgaagtcaatcttgcagcaggaagagactgccttcccaaga
ggcggcgggagtgtattgacgcccatagagcgaaagcagattgaggcacaggcagagcgc
gatgttctgttcgagcaagagacgggacaaaaggccggtgctgaggacgatgatggcgag
ttgtttgacgaggcagagtctgcacctgcatcgaagaaaaagcgcaaggccgaacgaaag
agcgatggagtttccaaagtggatggaagtggcatcaaaatatcagggctgagctacaag
tcactcgctgtgggcagtgttgtacttggtagagtaacagcaatcactggtcgagacatc
gcccttgcgcttccaaataacctgacaggatatgtgcccatcacctctgtgtcagaacga
ttgacgacgcgaatcgagcgattactggacgatgccaaatctggcgccgatgacagcgac
gaggacgaagacatcgacctaaagcagttgttccatatcggccaatggctacgcgccgtt
gtcactaccactggcacagatccagcagagggaaagagcaaaaagcacatcgagctgtcc
ttggacccttctgcagtcaatggaggtctaccagaggagagtgtggtagtcaacagcacc
gtacaggcaactgtcagaagtgtcgaagatcatggtctagtcatggatcttggtcttgcg
gacgacagtgtcaagggctttgtgagcaagaaagagctgggctcggcgtatactctggaa
aagatacaagacggacaggtgatgctttgtctggtcactggcaagggcagtaatggaaaa
gtcctcaagatctctccagacccaagcagaatgtcgctggcattgggcgacaaaaagttg
ccgactgtcaacgatgcgccatcagtggatgcatttctccccggtactgctgtcactgtc
ttgatcaccgagtctggagtacagggcatcgccggcaagatcatgggcatgcttgatgtg
acagccgatgtcatccatgcgcaggtgatcggactggaagacaaggacgtcagcaaaaaa
tacaaggtcggcagcaaagtctcggctcgcatcatttatgcaattcctggggacgatggc
gctcggcgggtgggaatttcgctccttgcacacacgttgtcgcttgtgccgcctcctgga
agactccccgatattgcaacgaaatcgttgaaggctcaagcggctgagctggagcaaatg
ctgccaatgtcgtctatcgttgagaaggccaaaattacccaggtctcgcccaacaaagga
ctatatctcaggatatccaccaaagtgggacgggaggagcgcgtctcgaccgcttttgca
cacatctcgcaaatatcggacaagcgaattgactcactgtcatccacatcgggctcctac
acgatcgattctgcacacaaagtacgcataattggctacagtccggtggacaacatgtat
tatgtatcactgaaacagtctgtgcttgatcaagccttcttgcgtttggaagatctcatc
gtcggtgacctcgtgaatggcacagtggataagatcattctgggaggcaccacaggcgtt
actggaatccttgttaaattgagcgacaacatcactggactcgtgccggaacagcatatc
agcgatgcgcagctgaagaaccccgaacgcaaataccgcgaaggcttcccagtgaaggca
agaatcctatctgtggacacagagaagagacatgttcgtcttaccttgaagaagcagctg
gtggatgatgtcgacggaaagatctggaaagcttacgatgatctgaaaccaggaatggag
agcaagggcaccatcatcaagctgcatcccaatggagctgtcgttcaattttatggcccc
gtcagagcgtggttgccagtcgcagagatgagcgaaacgttcattgagcgtccagagcag
cacttccggctcggacaaaccatccgcgtcaaaatcgtctctgtcagtcccgaggcccag
gagatgaaggtcacatgcaaagatagcgtcgcttttgacgaggaccaggagcaggcttgg
aacaatatctctggcggacagcttgtcagtggaacagtaactgagaagtcctccgagact
atctctgtcgatctagagagtgggctcaagggtatcatccgtgtgatgcacttggtcgat
ggctctctcgcgaaggctgagaaggaggcaaagcgcatccgcgtcgggcagaagttgcag
aacttgcttgtgcttgacaaacaggatcgtagccagaccgtgctgctgagtaataagccc
agcttggtcgaagatgccaaatccgacaagctgatcactactttctctgacatcgctcaa
ggagtcaaggttcgcggattcgtgaggaacaccacagccgacgcagtttatgtcgagttc
gccaatggcatcgtcggtctgctacccaagagtcagatcttggccgagtctttgagcaag
cctgaatttggtatgcgcaaggaccaaactttgaacctctgggtactcgacatggaccac
acagggaagcggtttcgcttgaccatgcgcgagcaagcggcatctgcagatcaaactagt
agctctgcgcctgctactctcgacgccctgagcaaacctatcgactcgtctctgaagtcg
atgtcagatctggagccaggcagaatcacaaaggcgcgcattgcttccgtccgtgcgaca
caaatcaatgtccgacttgcagacaatgttcaagggcgagtggatgtgagcgaagtcttt
gattcttgggaagagatcgccaacaaagcagcccccttgcagaatttcaaacaaaacgat
ctgatcgacgtcaaggtcttgggtatccatgatgctcgcaaccaccgcttcctacctttt
agccacagacagggcaagaccccggtcttcgagctctctgcaaagaaatcccgagtggaa
aaggacgacaagtctttgctcgagcttgattccgtgaaagcgggctcatctcacctcgct
tttgtcaataaccacgcagaaaactgtgtttgggttaatctctcgccaaatgttcggggc
cgagttgctttgatggacttgtctaacgacgtcggccaattgcagaatgtggaaaatcgt
ttccgcgtggggtgtgcgttgcgtgtcaaggtcaaggccgccgatatcagcactggtcga
ctagacctcactgccagacaggatgaagcatcagccgccttgacgctcaaagacttgtca
ccgggcatggtgctccctgcacgcgtcatcaagtccactgagcgcgcagtcactgttgaa
ctcgcgaaagatctgatctgtcatgtgccattggtcgaactcagcgacgactacgatgag
gtcaaccttgcgcagtacaacaagaatgacattgtgcgtgtctgcgtgatcggcgtcgat
accccaaacaagcgagcctttgtcagtttgagaccatctaaggtcttgagctccagcctg
cctgtcaaggatcaccacatctcgaatgtctcccaggtgaaggctggcgacatcgtacgc
ggctttgtcaagaaggtcgcggacaagggagttttcatctcacttggcgccgacgtggat
gctctcgttcgtatcgcagatctgagtgaccaattcgtgaaggaatggcggtcaatcttc
gaagtggatcaacttgtgaagggccgcgttctctctgtcgacacagaaagcagacagatt
caattgagcttgaagccgtcccatgttggtggccactacgagccgcctctcggcatcacg
gacattgaagtgggcatgaacgtcactggaagggtcaggaaagtcgaggatttcggtgcc
ttcatcgacatcgacaacacccaaccccgactttctggtctctgccatagaagcgaagtg
gctgctcgacgcatcgaggatgttcgcaagttgtacagtgctggcgacgtggtcaaggca
aaggtgctgagtgttgatgttgagaaccgcaagatcagcttgggcttgaaagccagctac
ttcgctaacgaaagggacgaagtcgacgaggatgaggaagaagagagtgaaaacgaagac
gtcgacatggatggcggtgttgaactcgaagacgactcagagggcggcatcgatattgac
ctagcggacgtgcaagatgcagacagcgacgacgaggatgcagcagaagatgccatggat
gttgatgaagagcctgcggcagcaagtggtggactgaagaccactggcttcgattgggca
ggtgatagcctcgacgcagagacgaacggcgccgcttacgaatccgaaccggagaccatg
accgtcaaaaagaagaagagaaaatcagagatcaaagaagacttgactggcgatctggac
aagaacggacctcaaagcaacagcgatttcgaaaggcgacttcttggtgagcccaacaac
tcgagtctctggattgagtacatggcattccagctccgactcagtgaggtccaacaagca
cgtaacatcgccgaacgtgctctgcgcaccatcaacattcgcgagaccgacgagaaggct
aacatctggatcgcgtggatcaatctcgaagtggaatatggcgacgatgagaccgtagag
ggagtcttcaaaaatgcatgccaagtgcaagatcctctcgagatgcacgagaaactcgct
tccatctatatcgattcgggcaaacacaacgaagcagatggcatatttgaacgcgtcgtt
gccaacaagaacttccgcgcttccccagacgtctggctcaactacgcgaccttcctgctc
aacaaccttcgcaagcctgagcgagctcacgcgctcttgtcaaaagctctccaatctgtc
cccgtaagcgagcatcgtctcttgacagccaaattcgctgccctagaattccgaacagcg
gctggcgaccctgagcgtggtcgcacaatgttcgaaaacatactcgacgaatatccgaaa
tggagttcgggttgggatatgtgggtcgacatcgagcgaagcaggatagcccactgcgaa
agcgatgaagcgaaagccgaggcgatcgagaagacgagggcgttgtttgagaggaccatt
aaggtgccaatgaagaagagaagagcgaagttcgttttcaagaagtggctagaattcgag
aacaaggagggtgcaatgcctgtgggcggcaagaagggaaagaagggcaatgctggtggc
agtcaggctgagagagtcactgttctggcgagagaatatgtgcagaagctggaggagaag
aaaggtggtgatggcgacgatgaggagtaa
DBGET
integrated database retrieval system
