Cercospora beticola: CB0940_03124
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Entry
CB0940_03124 CDS
T09388
Name
(RefSeq) DNA mismatch repair protein PMS1
KO
K10858
DNA mismatch repair protein PMS2
Organism
cbet
Cercospora beticola
Pathway
cbet03430
Mismatch repair
cbet03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cbet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CB0940_03124
03460 Fanconi anemia pathway
CB0940_03124
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbet03400
]
CB0940_03124
DNA repair and recombination proteins [BR:
cbet03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
CB0940_03124
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
35426934
NCBI-ProteinID:
XP_023456930
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All DBs
Position
3:2308643..2312022
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AA seq
1079 aa
AA seq
DB search
MATIKAIEGRSVHQIQSGQVIVDLNSVCKELVENSLDAGATSIDIRFKNQGLDSIEVQDN
GKGISPEDFDSIALKHYTSKLSTYEDLDSLDTFGFRGEALSSLCALSKFHILTARAEDGP
LGQRLDFEVSGKLKSTAVAAAQKGTTVYVEDLFHNLPVRRRELEKNIKREYNKVLGLMHS
YACISTGVRFSFSNTMPKGKKMSVFSTKSNTTTRENIANVFGAKTMMALAKLDLTLEMTP
SAGPSTQSAKTWSTQRSDRSMTVRVEGHVSKPIFGEGRQAPDRQMYFVNGRPCLLPQISK
VFNEVYKGFNLSQSPFVFANLIMDTNSYDVNVSPDKRSIMLHDQAALLETLRSTLTEMFE
QTDHTVPQSQLPNRKLPAYQPLTIARPKLDDVLSSADHSGAEDGEEEQEDVIDTEPRQQR
APAGSPPNLIHNWLGRDTELRKEPRQKPAAPAKEAITVVAQAYQEVAPAAPMVASCENAD
RAETTGQQREESTSPEPEERPAVAQSRPKTDAVHNPDPLGTPYNDLFSQRPPTQVASSEK
SLQTPISDKEHPALAIENDTGATETPIPAISTSSQKLAPGPVPNAFDRMRPKRTPLQTAE
ITVGDVTMTATIGSSPPYKKRRICKPDDSQRVADYGASPSLAGGLRKSFAAPGSQLELES
SAYPVHQVPVEASESEDEIEPDTAVHRTVTTALSRTSAPSHLPTSDLLEDLVPAPADQDE
WDEEYIDEDERKLREDERVARLIQEAEEVAARPTEVNLKRAAQVLKNSGNRKGSTLQLAR
FVQTTSESIRAQLGKIASAQQPCYDRTGHTGEGDSAIVKDQLDSEDAESRLSLTVTKSDF
ARMRIIGQFNMGFILAVRPGEKPGDEDDMFIIDQHAADEKYNYERFQRTVTLQSQRLVLP
KTLELSAIEEEIILNHSDALKLNGFEVEITSNGTDSDEPVPTGQRCRLLTLPMSKEKTFD
LSDLEELLHLLSEHPPGSSEIPRPRKVQRMLAMRACRSSIMVGRTLTHAQMKKVVKHMGE
MEKPWNCPHGRPTMRHLAGLNAWSGWQEGDLIDADQLDAAENAQPGRTTDWKAWLESRA
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atggccaccatcaaggccatcgaaggccgctccgtgcaccagatccagtctggtcaggtc
atcgttgacctcaattccgtgtgcaaagaattggtcgagaacagcctcgacgcgggcgcc
acctccatcgatatacgcttcaagaaccagggtctcgactcgattgaagtgcaagacaat
ggcaaaggcatcagccctgaggactttgacagtatcgccttgaagcactacacgtccaag
ttatccacctacgaggacctggactccctggacaccttcggcttccgtggcgaagctctg
tcatcactatgtgcattgtcaaaatttcatatattgacagcccgagctgaggatggtcct
cttggtcagaggcttgacttcgaagtctcaggtaagctcaagagtaccgctgtggcggcg
gctcagaaaggcacgaccgtctacgtcgaggacctctttcacaacctacccgtccggcgt
cgtgagctagagaagaacatcaagcgcgagtacaacaaggtgctcggactcatgcactct
tatgcctgtatcagcacaggagtacgcttctctttcagcaacacgatgcccaaaggcaag
aagatgtcggtattctcgacaaagtcgaacacgactaccagagagaacatcgccaatgtc
ttcggcgcgaagacgatgatggcactggctaagcttgacttgaccctggaaatgaccccc
agtgcaggtccgagcacacagagcgcgaagacttggtccacgcagcgttccgatcgctct
atgaccgtgcgtgtcgaagggcacgtctcgaagcctatctttggcgagggtcgtcaggct
ccagatcgacagatgtactttgtgaatggtcggccatgcttacttccccagatttccaag
gtcttcaacgaagtctacaaaggcttcaatctatcgcaatcgccctttgtatttgccaac
ctgatcatggacacgaactcctacgacgtaaatgtctcaccggacaagcgtagtatcatg
cttcatgaccaggctgcgctgctcgagactctaagatctacattgacagagatgttcgag
cagacggatcatactgtaccacagtctcaactgccgaaccgcaaattgccagcctatcaa
cccttgacaattgctcgacccaagctggacgacgttctgtccagtgcagatcatagtgga
gcagaagacggcgaggaggagcaagaagatgtcatcgacacagagcctcgtcagcaaaga
gcgcctgctggctcgccacccaacttgatacacaattggctcggccgggacactgagctt
aggaaggagcccagacagaagcctgcagctcccgcgaaagaggctataacggtcgttgca
caagcatatcaagaagtggctccagctgcaccaatggttgcttcatgtgagaacgcggat
cgggcagaaactacgggccagcaaagggaagagagcacatcgcctgaaccagaggagagg
cctgctgttgcgcagtcgcgaccgaaaactgatgctgtgcacaatccagacccactagga
accccgtataacgaccttttctcgcaacgtccaccgacgcaggtagcgtcatccgagaag
agcctgcaaacgccaatttcagacaaggagcatccagctctggccatcgagaacgataca
ggagctacagagaccccgattcctgccatctcgacaagctcgcagaagctagcccctggt
ccggtacccaacgcgttcgatcgaatgcgcccgaagcggacgcctctccagaccgcagaa
atcacagttggcgatgttactatgacggccactataggcagcagcccgccatacaagaag
cgccgcatatgtaagcccgatgactcccagcgagtggctgactacggcgccagtccttcc
ctcgccggcggtctgcgtaagagctttgcagcccctggttcacaattggaactagaaagc
agtgcataccctgttcatcaggtgccagtggaggcaagtgaaagcgaggatgagatcgaa
cccgatacggccgttcatcgtacagtcacaactgctttgagccgcacttctgctccatcg
cacctgcctacctccgacttgctagaagatctggtgccagctccggcagaccaagacgaa
tgggatgaagagtacatcgatgaagacgaaaggaagcttcgagaagatgaacgtgtagcc
cgattaatacaggaagcagaagaagtggctgccaggccgactgaggtgaaccttaaacga
gcagcgcaagtgcttaagaacagcggtaatcgaaaaggctccactttgcagctcgccagg
ttcgtgcaaacgacttcggaatcgatcagagcccagcttgggaagatcgcttcagctcag
caaccttgctacgaccgcaccggtcacactggagaaggcgatagcgccatcgtcaaggat
cagcttgactcggaagatgcagagtcgcggctgtcattgaccgtgaccaagtcggacttt
gctcgtatgcgaatcattggtcaattcaacatgggcttcatcctcgctgtacgccctgga
gaaaagcctggagacgaggacgacatgttcatcatcgatcagcacgccgctgacgagaag
tacaactacgagcgttttcaacgcactgtcacattgcaatcgcaacgtctggtgcttccc
aagactttggagctcagcgctattgaagaagagatcatactcaatcatagtgacgctctg
aaattgaatggtttcgaggttgagatcacgtctaacggtactgactcagacgagcccgtg
cccaccggccagcgttgtcgtctactgacattgcccatgtcgaaagagaagacgttcgat
ctctcagatctggaagagctgctgcacctgctgtcagagcacccacccggaagctctgag
atcccgcgtccgagaaaggttcagcggatgctggccatgagggcatgtcgaagctccatt
atggtcggaaggacgctcactcatgcccaaatgaagaaggtcgtgaaacacatgggagaa
atggagaagccctggaattgcccccatggcagaccgactatgagacacctggcaggattg
aatgcctggtccggctggcaggaaggtgatttgatcgacgctgatcaacttgatgccgca
gaaaatgcacagccggggcgtacgacagactggaaggcttggcttgagtctcgagcttga
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