KEGG   Cercospora beticola: CB0940_03264
Entry
CB0940_03264      CDS       T09388                                 
Name
(RefSeq) Set1 complex component swd2
  KO
K14962  COMPASS component SWD2
Organism
cbet  Cercospora beticola
Pathway
cbet03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cbet00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    CB0940_03264
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cbet03019]
    CB0940_03264
   03036 Chromosome and associated proteins [BR:cbet03036]
    CB0940_03264
Messenger RNA biogenesis [BR:cbet03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     CB0940_03264
Chromosome and associated proteins [BR:cbet03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     CB0940_03264
    COMPASS/SET1 complex (yeast)
     CB0940_03264
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st EIF3I WDR55 Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_Vps41 Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_EIPR1 NBCH_WD40 Beta-prop_NOL10_N Beta-prop_NUP159_NUP214 WD40_RFWD3
Other DBs
NCBI-GeneID: 35427074
NCBI-ProteinID: XP_023457327
LinkDB
Position
3:2715681..2717089
AA seq 362 aa
MVTEQQQPAVARVQDVITTFRPCRLFKAPPPAVYTSIDFDDSGEFLLLSRSDDTIQLFNI
KAGQHAKELKSQKYGSTLARFTHHSTSIIYASTKHNDDIRYLSMHDNSFIRYFKGHTARV
TSLNLSPNNDQFMSASMDGTVKLWDARSPNAQGQLVFESPWFTAYDASASVIAIASPPAQ
TIALYDLRNYDKPPFDTFDLRDVEHQFRSQGQKGGEGWLGMEFSNNGKYLMISTNGPGHY
ILDAFSGELIHYLQKPGGADYSHHAPGADLSTAMFGEGNTPSYVQSSACFSPDGRYVVGG
NGRSANLLVWDCAEEPRPDKVLEPSADLPSQKPAKVVAYNPRHNLLATADKDMMMWLPDP
DA
NT seq 1089 nt   +upstreamnt  +downstreamnt
atggtcacggaacagcagcagccggcggtggcgcgcgtgcaggatgtcatcaccaccttc
cgcccgtgtcgtcttttcaaggcacctccgcctgctgtctacacctccatcgacttcgac
gatagcggcgagttcctgctactttcgcgctccgacgacaccatccagctctttaacatc
aaggctggccagcacgccaaggagctcaagtcgcagaaatatggcagcacgctcgcccgc
ttcacccaccacagcacctccattatctacgcctccaccaagcacaacgatgacatccgc
tatctgtccatgcacgacaactccttcatccgctacttcaagggccacaccgcccgcgtg
accagcctgaacctcagcccgaataacgatcagttcatgagcgcaagtatggacggcact
gtgaagctgtgggatgcccgctcgcccaacgctcaaggccagctggtattcgaatcgccg
tggtttaccgcatacgatgcgagcgcctctgtcatcgccatcgcctcgccaccggctcag
accattgccctgtacgatctgcgcaattacgataagccgccgtttgacacgttcgatctg
cgagatgtagagcatcaattccggagtcaaggtcaaaaaggcggcgagggctggttgggc
atggagttctccaacaacgggaagtacttgatgatatccacgaatgggccaggacactac
atcctcgatgcattctctggcgagttgatccactaccttcaaaaaccaggtggagcggac
tacagtcatcacgctcctggtgccgacctctcgactgcgatgtttggagaaggcaacaca
ccttcatacgtccagtcgagtgcttgcttttcaccagacggaagatacgttgtcggagga
aacgggaggtccgccaatctgctcgtttgggactgcgcagaggagcccaggcccgacaag
gtattggagccctccgcggacctgccgagccaaaagccagccaaggtggttgcatataac
ccgcgacacaacctactggccactgcagacaaggacatgatgatgtggttacctgatcct
gacgcgtaa

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