Cercospora beticola: CB0940_03585
Help
Entry
CB0940_03585 CDS
T09388
Name
(RefSeq) Pre-mRNA-splicing factor rse1
KO
K12830
splicing factor 3B subunit 3
Organism
cbet
Cercospora beticola
Pathway
cbet03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cbet00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CB0940_03585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbet03021
]
CB0940_03585
03041 Spliceosome [BR:
cbet03041
]
CB0940_03585
03036 Chromosome and associated proteins [BR:
cbet03036
]
CB0940_03585
Transcription machinery [BR:
cbet03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
CB0940_03585
Spliceosome [BR:
cbet03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
CB0940_03585
Complex B
CB0940_03585
Complex C
U2 SnRNP specific factors
CB0940_03585
Chromosome and associated proteins [BR:
cbet03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
CB0940_03585
TFTC complex
CB0940_03585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF_A
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
35427395
NCBI-ProteinID:
XP_023457672
LinkDB
All DBs
Position
3:complement(3486041..3490096)
Genome browser
AA seq
1223 aa
AA seq
DB search
MANVQQTQAFYALTLEAPSAPTAAVLCNVIPGLKTGDQQIFEARGQRVLLHRITESADRT
ERKITTVCDQDAFGIIRGVAAFRIPATATDQLVISSDSGRVAMLQYDHEKNRFKRLHLET
YGKSGVRRTIPGQYLASDPRGRCIMMASVEKNKVVYMLNRHADGNILISSPHEANQWGSL
CFALCALDTGWEPPIFATLEVEYTEAESDPTGEAYQRREKQLVYYTVDMGLNHVVKTWSE
PVDYTANMLFGVPGGQDGPSGVLVCCEDRIYYKHDKAANLSIAIPRREGATEDKERKRQI
VAGCLHLAKTRHEFFFFLQTEDGDVFKLNINMATDEQGRQTADPEQIVLKYYDTFPVAKQ
MLLHKKGFLYIAAEDGNTQLFHIDDLADDPEFEPHNTFTSDGVSTDPSEPIEPTYFKPRE
LTMTHLAVDVPGLHPLMKTRVDNLTHEDAPQIYGIQGKGNRSQFKTIRHGLDVEILINNS
MGNVPYDNIWTFKHRATDEHHRYLLLSSNYGDLTIACSIGDSVEQIENSNFLENRATVHA
EQMGDAVLVQVHARGIRSIYQDGKLNEWNTPSHRTCVVASANQYQLLLGLSSAELCFFFM
GEDGVLVQLDEMPEMSGKITAMSVGQTPKGRQQSKYAVVGCDDCTIRVLSIELDTPLEAR
SVQALSAVPTSLEIVEMLDPASGTTINVVHIGLQSGLYLRAVIDETTGELGDVRTKFLGT
KAPRLCPVQVEDEDCVLACSSRPWLGYNHPQSHLYTVTPLIAEQMEAARAFISPDLSGLC
AIQGSSLLIFQLPSVEGRLSHSAIPLNNTPRGMTRNPYFPIWYTVQADGNTLSKATRDQL
RGKVIDDDEEATALERHLGLPRGTSHWASCIQAIDPLNRQGVVSTVELGENEAALCCTCV
AFESRNYELYLAVGTGQHMSPGTAQQAAGYVHIYKLEEDGTKMTFVHKTKFAQPIYALLP
FHGRLALGVGNELLIYDMGMKALLRKARGTATPNQIVSLEAHGNRIICGDVSESVTYLVY
KPGFNRLIPFVDDVIQRWTTGTTMIDYETVAGGDKFGNLWVVRCPEQPSQEADEEGAGGF
IMNERSYLNGAPYRLDLRAHYYCQDIPMSLQRTALVAGGQEVLFWSGLQGTLGMLVPFVT
REDVEFFTSLEQQLRAEDPPLAGRDHLMYRSYYVPVKGVIDGDLCERFMALSYDSKQKVA
AEVDRSVKEIEKKVQEMRTRVAF
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atggccaacgtccagcagactcaggcgttctatgcgctcacactggaagcgccttccgcg
ccgactgccgccgtgctctgcaatgtcattccgggactcaaaactggcgaccagcaaatc
ttcgaagcgcgaggccagcgcgttttactgcaccgcatcaccgagagcgccgaccggaca
gaacgcaaaatcacgacagtatgcgatcaggatgccttcgggatcattcgcggcgtcgcc
gcatttcgaatccctgcaaccgccacagaccagcttgtgatttcctccgactctggacga
gtagcgatgctacagtatgaccacgaaaagaaccgcttcaagcgcctccacttggaaaca
tacggtaagtcaggtgtgcgacggaccattccaggtcaatatttggcgagcgatcctcga
gggcgatgtatcatgatggcgagtgtggagaagaacaaagtagtctacatgttgaatcga
catgccgacgggaatattctgatatcgagcccacacgaggccaatcagtggggcagcttg
tgctttgcgctgtgcgctttggatacgggatgggaacctcccattttcgcgactctcgaa
gtcgagtacaccgaagcggagagtgatcccacgggagaggcgtatcagcggagagaaaag
cagttggtgtactacacggtggatatgggtctgaaccatgtcgtcaagacgtggagcgag
ccagtggactacacggcaaacatgcttttcggagtacctggaggacaagacggcccatcc
ggcgtgctcgtgtgttgtgaagaccgcatctactacaagcacgacaaggcagccaatctt
tcgattgccattccacgaagagaaggtgcaaccgaagacaaggagcggaagcgacaaatt
gtggcgggctgcctgcatctagcaaagaccagacatgaattcttcttcttcttgcagacc
gaagatggcgatgtcttcaagctcaacatcaacatggctacggacgagcagggacgacaa
acagcagaccctgaacagatcgtgctgaagtactacgacacattcccggtggctaagcaa
atgctgctgcacaaaaaggggttcttgtacattgccgccgaagacggaaacacacagcta
ttccacatcgatgaccttgcggacgatcctgagttcgagccacacaacaccttcacctcc
gacggcgtctcgacggatcccagcgagcccattgagccaacatacttcaagccacgcgag
ctcacgatgacacatctggctgttgatgtgccaggcttgcatccattgatgaagactaga
gtggacaatttgactcacgaagatgcccctcagatctacggaattcagggcaagggcaac
cgaagtcagttcaagactatcaggcacggtctagatgtcgaaatcctcattaacaatagc
atgggaaatgtgccttacgacaatatctggaccttcaaacaccgagcgacggacgagcac
cacagatatcttttgttgagcagcaactacggcgatctcacaatcgcgtgctcgattggc
gactccgtggagcagatcgagaactcgaatttcttggaaaatcgagctacggtgcacgca
gaacaaatgggagatgctgtactcgtgcaagtgcatgccagaggtatccgatctatatac
caggatggcaagctgaatgagtggaacactccatcacatcgcacatgtgtcgtggcttca
gcgaatcagtaccagctcttgctgggcctgagttcagcagagctctgtttcttcttcatg
ggcgaagacggcgttctcgtccaactggatgagatgcccgagatgagcggtaaaattaca
gcaatgtcggtagggcaaacaccaaagggacgacaacaatcgaaatatgcagtggtaggc
tgcgacgactgtaccattcgtgtcctcagtatcgagctcgatactccactcgaggcgcga
agtgtgcaggctctgtctgcagtccctacttctctcgaaatcgtggagatgcttgatcct
gcttccggtactaccatcaatgtcgtccacatcggtctgcagtcaggcctatatctccgt
gcagtcatcgacgaaacaactggagaacttggagacgtccgaaccaaattcctcggcacg
aaagcccctcgcttgtgtccagtgcaagtcgaggacgaagattgcgtgctcgcatgctca
agtagaccatggctcggctacaaccatccccaatcgcatctctacacggttacgcctttg
atcgcagagcaaatggaagccgcacgagccttcatcagtcccgacctcagtggactttgc
gccatccagggatcttcacttctcatctttcagctgccatcagtagagggcagactttca
cacagcgcaataccgctgaacaacactcctcgtggcatgactcggaatccgtacttcccg
atctggtatactgtccaagctgatggcaacaccctttccaaagccactcgtgaccagctc
cgcggtaaggtcatcgacgatgatgaagaagccacggcgctcgagcgccatcttggactg
ccacgcggtacttcgcattgggcatcctgcatccaagccatcgacccactcaaccgacaa
ggcgttgtgtccacagttgagctgggcgagaacgaggctgctttgtgctgcacgtgtgtc
gctttcgagtcacgaaactatgagttgtacttagcagtcggcaccggacagcacatgtcg
ccaggcactgcacagcaggctgccggttacgtgcacatctacaagcttgaggaggacggc
acaaagatgacattcgttcacaagaccaagttcgcacagccgatctacgccctactacct
ttccacgggcgactggcgttgggcgtgggcaacgagctgttaatttacgacatgggtatg
aaggctctgctgcgaaaagcgcgtgggacagcaacgcccaaccagatcgtctcgctcgag
gcgcatggtaatcgcatcatctgcggtgatgtcagcgagagtgtcacatacctcgtctat
aagcccgggttcaataggctgatcccatttgtggacgatgtcatccagcgatggacgaca
ggcacaacaatgatcgactacgagaccgttgcaggaggcgacaagtttggcaatctgtgg
gttgtgcggtgtccggaacaacccagtcaagaggccgatgaagaaggtgccggtggtttc
atcatgaatgagcgaagctacctgaatggtgcaccataccgactcgatctgcgtgcacac
tactactgccaagacatccccatgagcttgcagcgtaccgcacttgtggctggaggtcaa
gaagtgttgttctggtctggtctgcaaggtacactcggcatgctcgtgccattcgtcact
cgcgaggatgtcgaattcttcacttcgcttgagcagcaattgcgtgcggaggatcctccc
cttgcaggacgagaccatctcatgtatcgatcgtactacgtccctgtcaagggcgtcatt
gatggcgatctctgcgaacgtttcatggcgctcagctatgacagcaagcagaaggttgcg
gcagaagtggatcgcagtgtgaaggagattgagaagaaggtgcaggagatgaggacgaga
gtggcgttttaa
DBGET
integrated database retrieval system