Cercospora beticola: CB0940_03598
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Entry
CB0940_03598 CDS
T09388
Name
(RefSeq) putative U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
cbet
Cercospora beticola
Pathway
cbet03018
RNA degradation
cbet03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cbet00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CB0940_03598
09123 Folding, sorting and degradation
03018 RNA degradation
CB0940_03598
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbet03019
]
CB0940_03598
03041 Spliceosome [BR:
cbet03041
]
CB0940_03598
Messenger RNA biogenesis [BR:
cbet03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CB0940_03598
mRNA degradation factors
5'-3' decay
Lsm complex
CB0940_03598
Spliceosome [BR:
cbet03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
CB0940_03598
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
35427408
NCBI-ProteinID:
XP_023457461
LinkDB
All DBs
Position
3:3523420..3524258
Genome browser
AA seq
111 aa
AA seq
DB search
MLVELKTGETLNGHLVSCDTYMNITLKEVVQTSPDGDKFFRLPECYVRGNNIKYLRVPDE
VVDLVKDQQANQQSQRGGRGGGQRGGQGGGRGDRGRGRGRGGPRGRGRGGD
NT seq
336 nt
NT seq
+upstream
nt +downstream
nt
atgctcgtcgagctcaaaaccggcgaaacactcaacggccacctcgtcagctgcgacaca
tacatgaacatcacattgaaagaggtcgtgcaaacgagtccagacggagacaaattcttt
cggttaccagagtgttatgtgcgcgggaataatatcaaatatttgcgcgtgccggatgag
gtggtagatttggtcaaggaccagcaggcgaatcagcagtcacagcgcggtgggagaggt
ggtggacagaggggaggacagggtggaggtcgtggggatcgcgggcgaggacgtggtcgt
ggtgggccaagaggaagggggcgtggaggcgattga
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