Cercospora beticola: CB0940_03779
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Entry
CB0940_03779 CDS
T09388
Name
(RefSeq) Regulator of nonsense transcripts UPF2
KO
K14327
regulator of nonsense transcripts 2
Organism
cbet
Cercospora beticola
Pathway
cbet03013
Nucleocytoplasmic transport
cbet03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cbet00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CB0940_03779
03015 mRNA surveillance pathway
CB0940_03779
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbet03019
]
CB0940_03779
Messenger RNA biogenesis [BR:
cbet03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
CB0940_03779
mRNA cycle factors
P-body specific factors
CB0940_03779
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
35427588
NCBI-ProteinID:
XP_023456656
UniProt:
A0ABZ0NN21
LinkDB
All DBs
Position
3
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AA seq
1142 aa
AA seq
DB search
MAAMERRRKRDLKEQNVRAWNGDRDVFEVQSSLDSNMKKNTAFIKRLRTAITAANTSTFV
HEVRTLSLHKYLTEIISACYEGLTKLKVAADIAAGVEIISALHQRFGPEEFTAYLGWYLG
RGLATPDKAQLKALAPEVREREEKDRITRQRTLLRVATELWLVGALKSLEDIAQPAEAGK
AGKGTEAGAKPKVNGARPDAADPEPFPLEVLKDMLGHDREHVNLPLVVLFVKTFAWDILG
SKHGKSEGRQKVTDDGAVSSTNGNFDSATSTEHDDGSSPDPPMTPPELQQRFRNILQRYF
DDVKAHILRDQQRLAAQGKRNAEAYVKSGEVFEDRQSSHEKAQKAQEKLVSSAQTLAEVL
GAEMPDLSEKDSSNAGFESSIGLVKTGEYLRGQAEGAGIWEDEDERRFYENLVDLKDRVP
GILLEDGKKKKADNDEQVGKKIEDTADVKEKPAESDETSTAIANKTVGAQVDALLARLHE
LSTKDQVDQLAIDFCFLNSKASRNRLIKAIEEVPKGRTDLLPLYARLISTLGRHLQDVPD
AIIKYLDDEFRSLQRRKSKDFLGQVRMINMRYIAELTKFGVVPEHVIFHCLKVSLDDFSR
MNIEIIANLLENCGRYLLRNPETSPRMVSFLETLQRKKSAQHLGQQERMLIENAVYYVNP
PERAAIQQKERTPLDLFVRKLVYTDLSKKTLDKVIKQIRKLHWEESEVVEILRKIFVKPG
KIRFGNIYLLAMMLAALYRFHTDFAVTVLDELLERITVGLEINDFKFNQRRIAEAKYLGE
LYMYRVIDSALVFDTLYKILNYGHASYAQPGEVCMMDLPDDYFRIRLACALLETCGHCFE
KGAAKKKLDFYLSFLQYYINVKDPLPMDIEFVVQDTYNHLRPQWKLVLNDIQEASRVFGE
ACKQNYQDTASGKTAEPEEPEAEVNLSDDERRDGDENAADGDATHSGSDDDKAQGDDDDA
RANEQSDEEEHIVVTRPEDHRDPEADAEFDRELAKLMAESVDSRKFERKTMFDVPLPMRR
TVRDATINAAEGSGDEATAQPQTNGAGTMKFALLSKKGNRQQTRSIDMPSDSAFAVAMRS
QQEAERAEQQRIKNLVLNYDLTNDQEDGAFESLHNGPRYDKSGNTRSKQRARKLQLGDID
WT
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atggccgccatggagcggcgaagaaagcgagatttaaaagaacagaatgtacgagcatgg
aatggagacagagatgtgttcgaggtacagagctcgctggactcgaatatgaagaagaac
acagcattcatcaagcgtctccgcaccgccattaccgccgccaacacgtccacgtttgtc
cacgaggtccgaaccctgtcgctgcacaaatacctcaccgagatcatttcggcttgttat
gagggcttgacgaagctcaaagttgctgcagacatcgctgctggagtggagatcatcagc
gcgttgcaccagagattcggtccggaagagttcactgcgtatctgggatggtatctgggc
cgcggtttggctacaccagacaaggcacagctcaaggcgctggctccggaagtgcgtgag
agagaagagaaagatcgtatcacgaggcagcgaacattgctacgggtcgcaaccgagcta
tggctagtaggtgcactcaagagcctggaggacatcgcccaaccggccgaagcaggaaag
gcgggcaagggcacagaagcaggcgctaagcccaaagtcaacggagcgagaccagatgcc
gctgacccagagcctttccccttggaagtgctcaaggacatgctgggtcatgatcgcgaa
catgtcaatctgccgctggtcgtgctgttcgtgaagacatttgcgtgggacattcttgga
tcaaagcacggcaagagcgagggtcgccaaaaggttactgatgacggcgcagtgagtagc
acaaacggtaatttcgactccgcaacttccaccgagcacgatgacggatcctcgcctgat
cctccaatgacacctcccgagctgcagcagcgattccgaaacattcttcaacgatatttt
gacgatgtcaaggcccacatcctccgcgaccagcagcgcctggcagcacagggaaagcgc
aatgcagaggcatatgtcaaatcgggcgaggtctttgaggatcgccagtcgagccacgag
aaagctcagaaagcgcaagagaaactcgtatccagtgcgcagaccctggctgaggttttg
ggtgctgagatgcctgacttgtccgagaaggacagcagcaacgctgggttcgaaagcagc
attggcctggtaaagacaggcgagtatctgcgcggtcaggccgaaggcgccggaatttgg
gaagacgaggacgaacgtcgcttctacgagaatttggtggacctaaaagacagagtgcct
ggtattctcttggaagacggcaagaagaagaaagcagacaacgacgagcaagtcgggaag
aagatagaggacaccgcagatgtcaaggaaaagcctgctgagagcgacgagacgtccacc
gcgattgcgaacaagaccgtcggagctcaagtcgacgcacttctcgcccgcctgcacgag
ctttctaccaaagatcaagtcgaccaactggccatcgacttctgcttcttgaactcaaag
gcttcgcgcaaccgcctaatcaaggctatcgaggaagttcccaagggtcgcactgatcta
ctcccgctttacgcacgcctgatcagcacactcggccgccacctacaggatgtccctgat
gcgatcatcaaatatctggacgacgagttccgaagcctgcagcgccgcaagtccaaagac
ttcctcggtcaggttcgcatgatcaacatgcggtacattgcggaactcaccaagttcggc
gtggtgcccgagcatgtcatcttccactgtctcaaagtcagccttgacgacttttccaga
atgaacatcgagattatagcaaatctccttgagaattgtggaagatatcttctgcgcaac
ccagagacatcgccacgtatggtgtcctttttggagactctgcagcgcaagaagtcggca
cagcacttgggccagcaagaacgcatgctcatcgagaacgcggtgtattacgtcaaccct
cctgaacgcgccgccatccagcagaaagagcgcacccctctggacctatttgtgcgaaag
cttgtctacacggatcttagcaagaagacgctcgacaaagtgatcaagcagattcgcaag
ctacattgggaagagagtgaggttgtggagattctccgtaagatcttcgtcaagcccgga
aagattcggtttggcaacatctacctgcttgcgatgatgctcgctgcgctgtatcgcttc
cacaccgattttgcggtcactgtattggacgaactcctggagcgcatcaccgtcggtctt
gagattaacgacttcaaattcaaccaacgtaggattgccgaagcgaagtacctgggagag
ctgtacatgtaccgcgttatcgactcggcgcttgtattcgataccctgtacaagatcctc
aactatggacacgcaagctacgctcagcctggcgaagtatgcatgatggatctgccggac
gactacttccgcatccgactggcttgtgcattgcttgagacttgtgggcattgcttcgag
aaaggcgctgccaagaagaagctggacttctacctctcatttttgcagtactacatcaat
gtcaaggacccactgccgatggacattgagttcgtggttcaggatacctacaaccatctc
cggcctcagtggaagctggtcctcaacgatatacaggaagcttcccgggtctttggcgag
gcctgcaagcagaattaccaggacaccgcatctggcaagactgccgagcctgaagagcca
gaggcggaagtgaatctttctgatgacgagcgccgcgatggtgatgaaaatgcagctgat
ggagatgcgacgcactctggcagtgatgatgacaaggcacaaggtgatgatgacgacgca
cgagctaatgagcaatctgacgaggaagagcacattgtggtgactcgacccgaagatcac
agagatccagaagcagacgccgaatttgaccgcgaactcgccaaactcatggctgagagt
gtcgactctcgcaagttcgaacgcaaaacgatgttcgatgtcccgcttcccatgcgtcgt
acggtgcgtgatgccaccatcaatgctgctgaaggcagtggagacgaggcaacagcgcaa
ccacagaccaatggtgcgggcacgatgaagtttgcgctcctcagtaagaagggcaaccgt
caacagacacgatcgatcgatatgccttcagactctgcatttgcagttgccatgcgctcg
cagcaggaagctgaacgcgcggagcagcagcgtatcaagaacctggttctcaactacgat
ttgacgaacgaccaggaagatggcgccttcgaatccctccacaacggcccgcgatacgac
aaatcgggcaatacgcgctcgaagcaacgcgcacgaaagttgcagcttggagacattgat
tggacataa
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