Cercospora beticola: CB0940_04078
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Entry
CB0940_04078 CDS
T09388
Name
(RefSeq) DNA repair protein rhp42
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
cbet
Cercospora beticola
Pathway
cbet03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cbet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CB0940_04078
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbet03400
]
CB0940_04078
DNA repair and recombination proteins [BR:
cbet03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
CB0940_04078
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rad4
BHD_3
BHD_2
BHD_1
Transglut_core
Motif
Other DBs
NCBI-GeneID:
35427887
NCBI-ProteinID:
XP_023452051
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Position
4:703628..707258
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AA seq
1170 aa
AA seq
DB search
MPPFVSRKRHSDGASPPPPAKRAATTKAKSASKQAKATLFDAADTPRKTKSAAETKKFLE
SLDDDDDDVSLSEVDSDEFEDVPPAKRQKMAANDEERDDESDEDDDGMDWEDATAHPVAS
SSKPEPEIGDISVSLNEEGGYIEPEISLATGKKGPSKRERQFRVLTHCLHVQSLMWHNTV
RNSWLNDKEVQSILVNGLGDGVKREITRWRENMGTLTKEELDAKKSAAAKVKARKEKKGK
ETSKTRDWGYETAHLEQGVPNLSQGDPLLRLLKVVTAYWRKRFTVTAPAFRKQGYMPLKR
LREEIKHWEKNREDCDEHGERIENIEAFRKLAKSCEGSRDVGAQLFVALLRGIGLEARMV
ANLQPAGTGFSKAEEANEKKSKQTKKTEVNLDATAWEGEADSTSQKKAKTSKKAPPKLKN
EKPNRKSSRGNKSEPIQLEDSDSALSEPPSDLDNATQDDLDHDDDDDLSIIDVTPATRKK
PGKKYDCDLAFPTYWAEVCSPVSHKWIPVDPIVLSTIASTDELLQTFEPRGKKAENAKQV
ICYTIAHNSDGSAKDVTVRYIKKHQLPGKTKGMRILAEKVPIYNKRGKVKKYESYDWFRT
VMSPYDRPQKRRTTADDLEEQTDLKPFKPAKEVKEIEKESLQWYKQSAEFVLEQHLRREE
AILPGAKPVKTFIAGKGDKAVEHPVYKRSDVVNCKTVESWHKEGRAVKVGEQPMKHVAVR
AVTIVRKREMEEHFREHGEKLQQGLYGWDQTDWIIPPPIENGVIPKNAFGNMDVYVPTMV
PEGAVHLPLKGSAKICRKLEIDYAEACTGFEFGKQRAVPVLTGVVVAEEHEILVRDAWKE
HQKEVKRKEDVKRTAAALHWWRKMVMGMRIVERMRAEYNETSGDPDASNPFARKGAEGRK
AEADLDEDAGAGGFFRPGHDEEEVPQTSRRDVDAKPPSEEDGGGGFFAESEDEAPEHHAA
DDGLLVEEDPDGADTSLRSSVAAMPFTPMSLQSAHMPQGASEPEDEDEDDDETETAGGFI
ADDEEVDAPASKKAHVERHAVSKPPKSTAKPNGRRSSRKAIVSTTTSDEDALSSLSELEE
TDDGVAREEETPALRRERSSPQVVIPLTKKPVKPAKRVSRARVAKKATPTKSQYFNHESD
HQGDENEEDDSEPEVVKPSRTTARTRSKRS
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccttcgtctcgcgaaagcgtcactccgatggcgcatcgccaccacctccagca
aagcgagcagcaactacgaaggcgaagagtgcctcgaagcaagccaaggccaccttattc
gatgccgccgatacgccgaggaagacgaagtcggcagcagagacgaagaaattcttagaa
agccttgatgacgatgatgacgacgtatccctcagtgaggtcgacagcgacgaattcgaa
gatgtgccacctgcaaagagacaaaagatggcagcgaacgatgaggaacgggacgatgaa
agcgatgaagatgacgacgggatggactgggaagacgcgactgctcatcctgtcgcttct
tcgtcaaagcctgagcccgagattggcgacatcagtgtgtccttgaatgaggaaggaggc
tatatcgagcccgagatatcacttgcaaccggcaagaagggtccttcaaagcgtgagcgg
cagttccgtgtcctcacgcattgcctccacgttcaatcgctcatgtggcacaacactgtg
cgtaattcctggttgaacgacaaagaagtacagagcattttggtcaatggacttggtgat
ggcgttaaaagagaaatcacaagatggcgagagaacatgggcactctgacgaaggaagag
ttggatgcaaagaaatctgcagcggcaaaggtcaaagcgcggaaggagaagaagggcaag
gaaacgagcaagacgagggactggggttacgagactgcacatctggagcagggagtgccc
aatctgagccaaggtgatcctctattaaggctgctcaaggtggtcacagcatactggcgc
aaacgcttcactgtgactgcaccagcatttcgcaagcagggatatatgccgctaaagagg
ttgcgagaggagatcaagcattgggagaagaatcgcgaggattgcgatgaacatggcgaa
cgcattgagaatattgaagcgtttcggaaattggcgaagtcgtgcgaagggtcgagagac
gtgggcgctcagctgttcgtggctctgctcagaggcattggtcttgaggcgagaatggtc
gcaaacttacagcccgcgggcacaggcttcagcaaagccgaggaagctaatgagaagaaa
agcaagcagacgaagaagactgaggtcaacctggacgccacagcttgggaaggtgaggct
gatagcacatcgcagaagaaagcaaagacatcaaagaaagcgcctcccaagctgaagaat
gagaagccaaatcgcaagtcctccagaggcaacaaatcggagccaattcaactggaagat
tcggacagcgctctcagcgagccaccttctgatttggacaatgctacacaggacgacctt
gaccacgacgacgatgatgacctttcaatcatcgatgttactccggccacgcgaaagaag
cctggcaagaaatatgattgcgacctcgcgttcccgacgtactgggctgaagtttgttcg
cctgtatcgcataagtggatacctgtagatcctattgtgctgtccacgatcgcttcaacc
gacgaactattgcaaaccttcgagcctcgaggaaagaaggcagaaaatgcaaagcaggtt
atctgctacaccattgctcacaattctgatggctccgcaaaggacgtgacagttcgctat
atcaagaaacatcaactgcccggcaaaacaaaaggcatgcggattctggctgagaaagtc
cccatttacaacaagcggggcaaggtcaagaaatatgaaagctacgactggtttcggaca
gtcatgtcgccatacgaccgaccacagaaaaggcgcacgactgcggacgacctcgaagag
cagacagatctgaagccgttcaagcctgctaaggaagttaaagaaatcgagaaggaaagc
ctgcagtggtacaaacagtccgccgagtttgtccttgagcagcatctgcggcgcgaagaa
gcgattctgcccggcgcgaagcctgtgaagaccttcatagctggaaaaggcgacaaggct
gtggagcatcctgtgtacaagcggtcagacgtggtcaattgcaagactgttgagtcgtgg
cataaagaaggccgcgcagtcaaggtcggcgagcaaccgatgaagcacgttgcagtacgg
gcagtgacaatcgtccgaaagcgagagatggaagagcactttcgagagcacggtgagaag
ctgcagcaaggactgtacgggtgggaccaaacggactggatcatcccaccgccgatcgaa
aatggtgtgatacctaagaatgcatttggcaacatggatgtctatgtacccacgatggtt
ccagagggagctgtacatctgccactcaaaggctctgcgaaaatctgcaggaagctggaa
atcgactatgctgaagcatgtacaggcttcgaatttggcaagcaacgtgctgtgccggtt
ttgacaggagttgtcgtggccgaagagcatgagatcctcgtcagagatgcttggaaggaa
catcaaaaagaggtcaagcgcaaagaggacgtcaagcgcaccgcggccgccttgcattgg
tggcgcaagatggtgatgggcatgcgtatcgtggaacggatgcgtgcagagtacaatgaa
acatccggcgaccctgatgcgagcaacccattcgcaaggaaaggagccgagggtcgaaaa
gcggaagccgatctggatgaagacgccggagctggtggcttcttccgccctgggcacgac
gaggaagaggttccccagacctcgcgccgtgacgttgatgcaaaaccaccttcagaagaa
gatggtggaggtggattcttcgctgaaagcgaggacgaagccccggagcaccatgctgcc
gacgatggcttgctcgttgaggaagatcctgacggtgccgacacttcgctgcgatcatct
gtcgctgccatgccattcacgccgatgtcattgcaatctgctcacatgccgcagggagct
agtgagccggaggacgaggacgaggatgacgatgaaacagaaacagcaggcggcttcatt
gccgatgatgaagaagttgacgcgccagcgtcgaagaaggcgcatgttgaaagacatgcc
gtgtccaaaccaccgaaaagcaccgctaagccaaacggccggcgttcttccaggaaagct
atcgtctctacaaccaccagtgacgaagatgccttatcctcattgtcagagcttgaggag
acagacgatggagtggcaagagaagaggaaactccagcattacgccgggaacgaagctct
ccccaggttgtcataccattgaccaagaagcccgtgaagccagccaaacgcgtttcccga
gcacgagtcgcgaaaaaagcaacgccgacgaaaagtcaatattttaaccacgaaagcgat
caccagggagacgagaacgaagaagatgacagcgagccagaagttgtcaagccatcacgc
acaacggcgagaaccagatcgaagagatcctag
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