Cercospora beticola: CB0940_04424
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Entry
CB0940_04424 CDS
T09388
Name
(RefSeq) Pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
cbet
Cercospora beticola
Pathway
cbet03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cbet00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CB0940_04424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cbet03041
]
CB0940_04424
Spliceosome [BR:
cbet03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
CB0940_04424
Complex C
U5 SnRNP specific factors
CB0940_04424
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
RRM_4
PROCT
JAB
Motif
Other DBs
NCBI-GeneID:
35428232
NCBI-ProteinID:
XP_023452390
LinkDB
All DBs
Position
4:1650496..1658554
Genome browser
AA seq
2366 aa
AA seq
DB search
MAGIPPPPGWAPPPPPGAPPGLSANGIPPPPPGFAPPKDPHAEKLQQKKQKWLRQQRQRF
AEKRRGGFVETQKADMPPEHLRKIVKDIGDVSQKKFSADKRSYLGALKFMPHAVLKLLEN
MPMPWESSRDVKVLYHVNGCLTLVNEIPRVIEPVFHAQWATMWVVMRREKSDRRHFKRMR
FPPFDDEEPPLSWSENIEDVEPLEPIQMELDENEDEPVFEWFYDHRPLSDTSHVNGPSYK
EWNLSLPQMATLHRLSDPLLSDINDKNYFHLFDMPAFATAKALNVAIPGGPRFEPLYKDI
DPNDEDFGEFNAIDRIIFRAPIRTEYRVAFPYLYNSLPRSVKLGVYSYPQTVYVKTEDPN
LPPFYFDPVINPISSRQVMPKNLTISHEDEIFGQGNNEEPDEEDGGFVMPEGVEPFLEDE
DLYNDDTAAAIALWWAPYPFDRRSGKMVRAQDVPLVKQWYLEHVPAGQPVKVRVSYQKLL
KTYVLNELHKKPPKAQNKQLLGRNLKRTKFFQQTTIDWVEAGLQVCRQGFNMLNLLIHRK
NLTYLHLDYNFNLKPIKTLTTKERKKSRFGNAFHLMREILRLTKLIVDAQVQYRLGNIDA
FQLADGILYAFNHVGQLTGMYRYKYKLMHQIRSCKDLKHLIYYRFNSGPVGKGPGCGFWA
PAWRVWLFFLRGIIPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFDLELRASVMA
DLMDMMPEGIKQSKVNTVLQHLSEAWRCWKSNIPWKVPGLPKPIEDVILRYVKSKADWWV
SVAHYNRERIRRGATVDKTVAKKNLGRLTRLWLKAEQERQHNYLKDGPYVSTEEGVAIFT
TAVHWLESRKFQPIPFPSVSYKHDTKILILALERLREAYSVKGRLNQSQREELALIEQAY
DSPGTTLARIKRFLLTQRSFKEVGIDMNDNYSSINPVYDIEPIEKITDAYLDQYLWYQAD
QRRLFPAWIKPSDSEVPPLLTYKWAQGINNLSNVWSVDEGECNVMLETRLDKVYEKIDIT
LLNRLLRLIMDHNLADYISSKNNVQLNYKDMNHTNSYGMIRGLQFSAFVFQYYGLIIDLL
LLGLQRASEMAGPPNAPNDFLQFRDRATESRHPIRLYTRYIDKIWIFFRFTADESRDLIQ
RFLTEQPDPNFENVIGYKNKKCWPRDSRMRLMRHDVNLGRAVFWDMKNRLPRSITTIEWD
DTFASVYSRDNPNLLFAMNGFEVRILPKIRNQNDEFPTKDSVWALVDNATKERTAHAFLQ
VTAEDIAKFNNRIRQILMSSGSTTFTKIANKWNTTLIALFTYYREAAVSTVELLDTIVKC
ETKIQTRVKIGLNSKMPSRFPPAVFYTPKELGGLGMISGSHILIPASDKRWSKQTDSGVS
HFRAGMSHDEETLIPNIFRYIIPWEAEFIDSQRVWTEYSQKRLEANQQNRRLTLEDLEDS
WDRGLPRINTLFQKDRSTLSFDKGFRARTEFKIYQHMKSNPFWWTSQRHDGKLWNLNAYR
TDVIQALGGVETILEHTLFKATAFPSWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPN
RRFTLWWSPTINRANVYVGFQVQLDLTGIFLHGKIPTLKISLIQIFRAHLWQKIHESVVM
DLCQVFDQELEALGIETVQKETIHPRKSYKMNSSCADILLFASHKWSVSQPSLLYDTKDN
MGLTTTNKFWIDVQLRYGDYDSHDIERYVRAKYLDYTTDSMSIYPSATGLMIGIDLAYNL
YSAYGQYFPGLKQLVQQAMAKIMKANPALYVLRERIRKGLQLYASESNQEFLNSQNYSEL
FSNQIQLFIDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQK
RLGQLAKWKTAEEVAALIRSLPVEEQPKQLIVTRKGLLDPLEVHLLDFPNISIRASELQL
PFQAAMKVEKLGDMILRATEPQMVLFNLYDEWLKSISSYTAFSRLVLILRALHVNQDKTK
LLLRPDKTVITQEHHIWPSLSDDDWVKVEVQLRDLILNDYGKKNNVNTSSLTNSEIRDII
LGMEISAPSMQRQQAAEIEQQQQDQAQLTAVTTKTQNVAGEEMIVTTTSAYEQQSFASKT
EWRTRAIATSNLRTRANNIYISSEDIRDDEHHFTYVMPKNILKRFIAVADLRVQVAGYLY
GVSPPDNKQVKEIKTIVMVPQVGSTRDIQLPRNLPENEMLQGLEPLGVIHTSAGNETNYM
TAQDVTQHAKLMAAHPSWDRKTVTMTVNFTPGSVSLSAWSLTPQGYQWGAENKDLSSDQP
AGFSTAFGEKSQLLLSDKIRGYFLVPEDERWNWSFLGSGFGDREKGRVFVQVGIPRRFYD
DVHRPIHFQNFAELEDVWVDRSDNLA
NT seq
7101 nt
NT seq
+upstream
nt +downstream
nt
atggctggcatccctccaccgccgggatgggcacctccaccgcctccaggagcgccgccg
ggactctcagcgaacggtattccccctccgccacctgggtttgcgccgcccaaggaccct
catgcggagaagctgcagcagaagaagcagaaatggctacgacaacagaggcagcgtttt
gcagagaagcgacggggtggctttgtggaaacacagaaagcggacatgcctccagagcac
ttgcgaaagatcgtcaaagacattggagatgtgtcgcaaaagaaattcagcgcagacaag
agaagttatcttggagcgctgaagttcatgccacatgctgttctgaagctgttggaaaat
atgcctatgccatgggagagcagtcgggatgtaaaggtcctgtaccacgtcaatggatgt
ttgacattagtcaacgagattccgagagtcatcgagccagtgtttcacgctcagtgggcg
acgatgtgggtggtcatgcgacgagaaaagagcgatcgacggcatttcaagcgtatgcga
ttcccgccttttgacgacgaggaaccaccgctttcttggagcgagaacatcgaggacgtc
gagcctttggagccaatacaaatggagctggacgagaacgaggacgaacctgtgttcgag
tggttctacgatcatcgcccgctttctgacactagccatgtcaatggaccgagttacaaa
gagtggaacctgtcattaccgcagatggccacgctgcatcgattgagtgacccgctgctg
tcggacatcaacgacaagaattatttccacctcttcgatatgccagcatttgcgaccgca
aaggcgctgaatgtggcgattcctggaggaccacgattcgaacctctttacaaggatatc
gacccgaacgacgaagactttggcgaattcaacgcgatcgatcgaatcatcttccgtgct
cccatccgaactgagtaccgtgtcgccttcccatatctgtacaacagcttgcctagatct
gtcaagctcggggtctacagctacccgcagacagtttacgtcaagaccgaggacccaaat
ctaccgcctttctacttcgacccagtcataaatcctatttcttcaaggcaagtgatgccg
aagaacctgacaatcagccacgaagacgagatctttgggcaagggaacaacgaagagccg
gacgaggaagacggcggctttgtcatgccagaaggtgtcgaaccattcctcgaggatgaa
gatctgtacaacgacgatactgcggcagctatcgcgttgtggtgggcgccatatccattc
gacaggcggtcaggcaagatggtgcgagctcaagatgtgccgctggtcaagcagtggtat
ctggagcacgttccagctggtcagcctgtcaaggtcagagtgtcctatcagaagttgctg
aagacatatgtcctgaacgagctgcacaagaaaccacccaaggcgcagaacaagcaattg
cttgggcgcaacctgaagagaacgaaattcttccagcagaccaccatcgactgggtagag
gccggtcttcaggtctgccgacaaggtttcaacatgctgaacttgctcatccaccgcaag
aacttgacctatctccacctggactacaacttcaacctgaagcctatcaagactttgaca
acgaaagagcgaaagaaatcgcgtttcggaaatgctttccacttgatgcgtgagatcctt
cgattgacgaagcttatcgttgatgctcaagtgcaataccgtcttggcaacatcgacgcc
ttccagctggcagatggcatactctacgccttcaaccacgtcggccaactcactggtatg
tatcgatataagtataagcttatgcaccagattcgatcgtgcaaggacttgaaacacttg
atctactatcgattcaacagtggaccagttggcaaggggcctggctgcggtttctgggct
cctgcgtggagagtgtggctgttcttcttgcgtggtatcatccctctactggagcgatgg
ctcggcaacttgcttagcagacagttcgagggtcgtcactcgaaaggtgtggcaaagaca
gtcaccaagcaacgtgttgagtcgcacttcgatctcgaactccgcgcatctgtcatggcc
gacttgatggacatgatgccggaaggtatcaagcagagtaaggtcaacacagttttgcag
cacttgtcggaggcatggagatgctggaagtcaaatattccttggaaggtgcccggtctg
cctaagccgattgaagatgtcattctgcgatacgtcaagtcaaaggcggactggtgggta
tccgtcgcacactacaaccgtgagcgcatccgacgtggtgcaaccgtggacaagaccgtg
gctaagaagaatcttggtcgtctcactcgtctgtggttgaaggctgagcaggaacgtcag
cacaactatctcaaagacggtccctatgtcagcaccgaagagggtgtcgccattttcacg
actgcggtgcactggctggagagcaggaaattccagcctattccattcccatcggtcagc
tacaagcatgacaccaagattttgattctggctctcgagcgtctacgagaagcctactcg
gtcaagggtagactgaaccagagtcagcgcgaggagcttgcactcatcgagcaagcatat
gacagccctggcacgactttggcgcgcattaagcgcttcctgctgacgcagcgctcattc
aaggaagttggtattgacatgaacgacaattacagctcgatcaacccagtctacgatatc
gaacccatcgagaagatcacagatgcctatcttgatcagtacctctggtaccaagcagat
cagcgacgcttgttcccagcgtggatcaagccctctgactctgaagtgcccccactcctc
acctataaatgggcgcagggcattaacaatttgtcgaacgtctggagtgtcgacgaaggc
gagtgcaacgtcatgctcgaaacgaggctggacaaagtgtatgagaagatcgacatcacg
cttctcaacagactgctgcgactgattatggaccacaacttggctgactatatctcctcc
aagaacaacgttcagctgaactataaggacatgaatcacaccaacagctatggtatgatt
cgaggacttcagttcagcgcctttgtcttccagtattacggcttgatcatcgatctgttg
ttgcttggcttgcagcgtgcatcggaaatggctggtccaccaaatgcgccgaacgacttt
ctccaattccgggacagagccacggagagtcgtcaccccatccgactctacacacgctac
attgacaagatctggatcttcttccgcttcaccgctgacgagtcgcgtgatctgatacaa
cgcttcctcaccgagcaaccagatccaaacttcgagaatgtcattggatacaagaacaag
aagtgctggcctagggactcacgtatgcgcttgatgcgacacgatgtcaacttgggacgt
gctgttttctgggatatgaagaaccgcttgccacgttctatcaccactatcgagtgggac
gacacgttcgccagtgtgtacagcagggacaacccgaatttgttgttcgccatgaacggc
ttcgaggtccgcattctgccaaagattcgcaaccagaacgacgagttcccaaccaaagac
tccgtctgggcgcttgttgacaatgctaccaaggaacgcaccgcccatgccttccttcag
gtcactgccgaggatatcgccaagttcaacaacaggattcgtcagatcttgatgagctct
ggcagcacgactttcaccaagatcgccaacaagtggaacacgaccctcattgcactgttc
acgtactatcgtgaagccgcagtgagcacggttgagctgcttgacacaattgtgaagtgc
gagaccaagattcaaactcgtgtcaagattggtctcaattccaaaatgccctcgcgtttc
ccaccagccgtcttctacactcccaaggaattgggtggtcttggtatgatctctggttca
cacattctcatcccagcctcggacaagcgctggtccaagcagaccgatagtggtgtcagc
catttccgcgcaggcatgagccacgatgaagagaccctcatccccaacatcttccgttac
attatcccatgggaggccgaattcatcgactcgcaacgcgtatggaccgaatattcgcag
aagagacttgaagctaaccaacagaaccgacgtctgacattggaggacctggaagactcc
tgggatcgtggtctgccccgtatcaacacacttttccaaaaagaccgaagtactttgtca
tttgacaagggtttcagagcccggacggagttcaagatctatcaacacatgaagagcaat
cccttctggtggactagccagaggcatgacggaaaactttggaatctcaatgcctaccgg
acggatgtcatccaagcgctgggaggtgttgagaccattctggaacacacgttattcaaa
gctacagcttttccaagttgggagggcttgttctgggagaaagcctccgggttcgaggaa
tcgatgaagtacaagaagctcacgaacgctcaacgatccggtctcaaccagattccaaac
cgtcgtttcacgctctggtggtcgcctaccatcaatcgtgccaatgtctacgtcggtttc
caagtccaattggatctcacgggtatcttcttgcacggaaagattccaacactcaagatc
tcgctcatccagatcttccgggcccacttgtggcagaagatccacgagtccgttgtcatg
gacctgtgccaagtcttcgaccaggaactcgaggctttgggcatcgagactgtgcagaag
gagactatccatccgcgaaagtcctacaagatgaactcttcctgcgctgatatcctcctc
tttgcgtctcacaagtggagtgtcagccagccgagcttgttgtacgacaccaaggacaac
atgggcctaacgactacgaacaagttctggatcgatgtgcagctcagatatggagactac
gattcacacgatatcgagagatacgtccgtgccaagtatctggactacacgactgatagc
atgtcgatttacccatcggctaccggcttgatgatcggcattgatctggcatacaatttg
tactctgcttacgggcagtacttccctggtctcaagcagctggtacaacaagccatggcc
aagatcatgaaggccaatccagcgctgtacgtgctccgcgagcgtattcgaaagggtttg
cagctgtacgcatctgagagtaaccaggagttcctcaactctcagaactactcagagctg
ttcagcaaccagatccagctcttcatcgacgacaccaatgtctaccgtgttacgatccac
aagacgtttgaaggcaacttgacaaccaagccgatcaacggtgctatcttcatcttcaat
cctcgaactggtcaactgttcttgaagatcattcacaccagtgtctgggctggtcagaag
cgccttggtcagctcgccaagtggaagacggccgaagaagtggctgcacttattcgatct
ttgccagtggaagaacagcccaagcagctcattgtcacgcgaaagggtctcctcgacccc
ctcgaagtgcacttgctcgatttcccgaatatcagcattcgtgcatcagagcttcaactt
cctttccaggctgccatgaaggtcgagaagctaggagacatgattctgcgtgccactgag
ccgcagatggtgctgttcaatctctacgatgaatggctgaagagcatctcttcgtatacc
gcgttctcccgtctggtcctgatattgcgtgcactgcacgtcaaccaggataagacaaag
ctgctgctgcgacccgacaagactgtcatcacgcaggaacaccacatctggccctcgctt
tccgacgatgactgggtcaaggtcgaagtgcaattgcgtgacctcatcttgaatgactac
ggcaagaagaataacgtcaacacctcttcgctcaccaatagcgaaattcgagacatcatc
cttggtatggaaatttccgcaccaagtatgcaacgtcaacaggccgcagagatcgagcag
cagcaacaggatcaagctcaactcaccgctgtcactaccaagacgcagaacgtggctggc
gaggagatgattgttactacaacgtcggcatacgagcagcagtcctttgcatccaagacc
gagtggcggacgcgagccatcgccacatcgaacctgcggacacgtgccaacaacatctac
atttcctctgaagacattcgcgacgatgaacaccacttcacctacgtcatgccaaagaac
atcctgaagcgcttcattgccgttgcagatcttcgtgtgcaggtcgctggctacctttac
ggtgtctctccgccagacaacaagcaagtcaaggaaatcaagacgatcgtaatggttcct
caagttggctcaacgcgcgacatccagctcccacgcaacctgccggaaaacgagatgctg
caaggtctcgagccactgggtgtcatccacacctcggcaggcaacgagaccaactacatg
acggcacaggatgtcactcaacacgccaaattgatggcggctcacccatcatgggatcgc
aagactgtgaccatgactgtgaacttcacacctggctcggtctctctttctgcatggtct
ctgacgcctcaaggctaccagtggggcgcagagaacaaggacctgtcatccgaccagcct
gccggattctctactgctttcggcgagaaatctcaacttcttctgtcggacaagatccga
ggatatttcttggtgccggaggatgagagatggaattggtctttcttgggatctggcttt
ggtgatcgcgagaagggccgcgtgtttgtgcaagtcggcatcccgcgacgattttacgat
gatgtgcatcgacccatccatttccagaatttcgctgagctggaggatgtttgggtcgac
aggagcgataatctggcataa
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integrated database retrieval system
