Cercospora beticola: CB0940_05328
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Entry
CB0940_05328 CDS
T09388
Name
(RefSeq) U3 small nucleolar RNA-associated protein 6
KO
K14557
U3 small nucleolar RNA-associated protein 6
Organism
cbet
Cercospora beticola
Pathway
cbet03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cbet00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CB0940_05328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cbet03009
]
CB0940_05328
Ribosome biogenesis [BR:
cbet03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CB0940_05328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U3_assoc_6
HAT_Syf1_CNRKL1_N
TPR_14
HAT_PRP39_N
HAT_PRP39_C
DUF3456
Suf
NRDE-2
FAD_binding_7
TPR_CcmH_CycH
Motif
Other DBs
NCBI-GeneID:
35429136
NCBI-ProteinID:
XP_023455267
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Position
2:complement(128724..130237)
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AA seq
453 aa
AA seq
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MAAASDKARFYLEQYVPELREYEAKEIFTRDQIAAITKKRSDFEHTLNARGSTPADYARY
AQHEMNLYSLLKKRCKRLGIQKTATTNFNGQRTVFFILDRAVKKFPGDVGLWMQYVDFCK
KEKANKKLAKVLTRMLRLHTRNWKLWVLAAKHYAEVQGDMGTARSYFQRGLRFCKEEKRI
WIEYLRLELTYLAKLAARRKILGIDEDSQMTGTGEEEGLGGDGDEVKLPAVTAADFEDDE
AGKGVEEVNTDLLKRLKDAPAFTGGIPMAIFDAAMKQFAAKAAGIAEEMYDLVASFEQVP
AIENVRDHILEWLRTDASTSAEHIICEAKNELHGLDSRSAAFPAALTRALGHIKTGRETL
VDTGRPNMAEKIALLLLPYLQHAGQMDRGVVKVLESTVKRNLKLSADAPNQSGRQHPTAV
IVAKLQYEGASQDIRTLERLVAEIRDDYVGASN
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgcgtccgacaaagcgcgcttctacctcgagcagtacgtgcccgagctgaga
gagtatgaagcaaaagaaatcttcacgcgagatcaaattgccgccattaccaagaagcga
tccgatttcgaacataccctcaacgcccgtggcagcacgcccgccgactatgctcgatat
gctcagcatgagatgaacctgtattccctgctcaaaaagcgctgtaaacgacttggcatt
caaaagaccgccaccacgaattttaatggccaacggactgtcttcttcattctcgatcgt
gcagtgaagaagtttccaggcgatgttgggctctggatgcaatacgtggatttctgcaag
aaagagaaagcgaacaagaagctggcaaaggttcttaccagaatgctgagattgcacacg
cgcaactggaaactttgggtcctcgctgccaagcactacgctgaagtgcaaggtgatatg
ggaacggccaggtcatatttccagagaggcctgcgattctgtaaagaggagaagagaatc
tggattgagtacctgaggcttgagctcacgtatttggcgaagttggcggccagaagaaag
atcttgggcatcgatgaggatagtcagatgacgggtacgggcgaggaggagggcttggga
ggagatggtgacgaggtcaaactacctgcagtgacagccgcagacttcgaagacgacgag
gccgggaaaggtgtcgaagaggtcaatacggatctgctaaagaggctgaaggatgcgcct
gcgttcacgggtgggatacctatggccatcttcgatgctgcaatgaagcaatttgcggcg
aaagcggctgggatcgcagaagagatgtacgacctggtcgcaagctttgaacaggttcca
gcaattgagaatgtgcgagatcacatccttgaatggctgcgcacagatgcatcgacctca
gcggagcacatcatctgcgaagcaaagaacgaacttcacggcctcgattcacgcagcgcc
gcctttccagctgctcttacgcgagctctgggccacatcaagactggccgagagaccctc
gtggacactggacggccgaacatggccgagaagattgctctacttcttctcccatactta
cagcatgctgggcagatggatcgtggtgtggtcaaggtactggagtcgaccgtcaagagg
aacttgaagctctccgcggatgcacccaatcagtctggcagacaacatccgactgctgtc
atcgtcgcaaagctgcaatacgaaggtgcttcgcaagatattcggacactcgagcgactg
gtcgcagagattcgagatgattatgttggggcctcaaattag
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