Cercospora beticola: CB0940_05351
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Entry
CB0940_05351 CDS
T09388
Name
(RefSeq) putative ATP-dependent RNA helicase prh1
KO
K14781
ATP-dependent RNA helicase DHR2 [EC:
5.6.2.6
]
Organism
cbet
Cercospora beticola
Brite
KEGG Orthology (KO) [BR:
cbet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cbet03009
]
CB0940_05351
Enzymes [BR:
cbet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CB0940_05351
Ribosome biogenesis [BR:
cbet03009
]
Eukaryotic type
90S particles
Helicases
CB0940_05351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
WHD_HA2
AAA_19
AAA_16
AAA_29
ABC_tran
nSTAND_NTPase5
T2SSE
nSTAND3
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
35429159
NCBI-ProteinID:
XP_023455979
LinkDB
All DBs
Position
2:complement(203967..206591)
Genome browser
AA seq
730 aa
AA seq
DB search
MSRFKNLDGSIEAQTKRPKKRKREEAHDPYKAKKQKLLQGRTALPIWPRAEEIRESLSGE
KDILILTGETGSGKSTQVPQFLLEAKWCTGKIAVTQPRRVAAITLARRVAEEMGSPLGSA
SPASKVGYSVRFDDNTSPGTRIKYLTEGMLLQELLREPKLGQYSCVVVDEVHERSVDVDL
ILGFLKQLVRERREKGKILKVVVMSATADVESLGEFFARGDDEVCGKDESDQEKDAETRG
GEGAEDSFEGFEDAEPQQENNVLPDRIARCHVEGRQYPVKLHYASGPTEDVIDAALQQIF
QIHCKEPMPGDILVFLTGQEAITGLQRLVEEFASSLTTDFPKMLVLPLYAALPQHAQQRI
FERAPPNTRKVILSTNIAETSVTVPGVRFVIDTGKAKIKQFRPRLGIESLLIKPISRSSA
DQRKGRAGREAPGQCFRLFTEAEYKSLEQQTKPEILHCDLTGAVLKMKARGIEDVFGFPF
LTPPSQEAMGRSLMQLHQLGCINDAGKITEIGRKVARLPLPPPLGRVILESAKPERDCLL
EVIDVVAGLDVESIWLPAETEEAREKAMEARSQLFSRRGDHITLLNAIRTYADENSDRKR
WATDHMISHRAMQNVMEVRKQLRVLTKSLLEKPTIRQTVSEECQDAVLKCFLRGFSGNVA
RLCPDKSYKTFGGKQQQVAIHPSSVLYGVKREAIMFNDFTFTTKPWARKVSAVELRWLEE
VEYLMGGDGS
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcttcaagaacctggatggctcaatagaagcacagactaaaagaccgaaaaag
cgaaagcgcgaagaagcacacgacccgtacaaagccaagaagcaaaaacttctccaaggc
cgaacagcacttcccatctggccccgagcagaagaaatccgcgaatcattatcaggcgag
aaagatattctgatcttgactggagagaccggaagcggaaaatctactcaagtaccgcaa
ttcttgctcgaggcgaaatggtgtactggaaaaatcgccgtgacgcaaccgcgtcgagtg
gcggctattactctggctagacgtgttgcggaggagatgggttcgccgttggggtctgcg
agtccggcgagtaaggttgggtatagtgtgaggtttgatgataatactagtcctgggacg
aggattaagtatctcacggaaggaatgctgttgcaggaattgttgcgggagccgaagttg
gggcagtatagttgtgtggttgttgatgaggtgcatgagaggtcggtggacgtggatctg
attttgggatttctgaaacagttggtgagggagaggagggagaaggggaagattttgaag
gtggtggttatgagtgctacggctgatgtggagagtttgggcgagtttttcgcgagggga
gacgatgaagtctgcgggaaagatgaaagtgaccaggaaaaagacgctgaaaccagggga
ggagaaggtgcagaggactcattcgaagggtttgaagatgccgagcctcaacaggagaac
aatgtcttacctgatcgaatcgcgcgatgtcatgtggaaggacgacagtaccccgtaaaa
ctgcattacgcgagcggaccgactgaggacgttatagacgcagcactccaacaaatattc
caaatacactgcaaggagcccatgcctggagacattctggtcttcctaacaggacaagaa
gcgattactggcctgcagagactagtcgaggagtttgcatcgagtctgacaaccgacttt
ccgaagatgctcgtgcttccgctctacgcagccttgcctcagcacgcacagcaacgaata
ttcgaacgagcgccaccgaatacaaggaaggtcattctttcgaccaatatcgccgagact
tctgtcacagtacctggcgtgcgatttgtgatagacacaggcaaggcgaaaatcaaacaa
ttccggccacgtctcggtattgaatccttgctgatcaagcccatctcgcgatcatcagca
gaccagcgaaaaggtcgtgctggcagagaagcgcctggacagtgcttcagactgttcaca
gaagcggagtacaagtcgctagaacaacaaaccaagccagaaatcctacactgcgatctc
acaggcgccgtcctcaaaatgaaagccagaggaatcgaggatgtcttcggcttcccgttc
ctcacaccaccatcccaagaagccatgggccgctcgctcatgcaactccaccaactcggc
tgcatcaacgacgccggcaaaatcacagaaatcggacgtaaagtcgctcgcctaccactc
ccaccacctctcggccgcgtaatcctcgaatccgccaaaccagaacgagactgcctgctc
gaagtcatcgacgtcgtcgccggtctcgatgtagaaagtatctggctcccagccgaaaca
gaagaagcccgtgaaaaagccatggaagcccgctctcaactcttctctcgtcgaggagac
catattacactcttaaacgccattcgtacctacgcagacgagaactcggatcggaaacgc
tgggcgacagaccatatgatttctcaccgtgctatgcaaaatgtcatggaggtgcggaag
caacttcgtgttctcacaaaatctctgctggaaaaacctactatccggcaaaccgtctcc
gaagaatgtcaggacgctgtactgaagtgtttcttgagaggtttcagcgggaatgtggcg
aggttgtgtccggataagtcgtataagacttttggagggaagcagcagcaagttgcgatt
catccttcttcagttttgtatggggtgaagagagaggcgattatgtttaacgattttacg
tttacgacgaagccttgggcgagaaaggtttcggcggtggagttgaggtggttggaagag
gtggagtatctgatgggtggcgatgggagctag
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