Cercospora beticola: CB0940_05406
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Entry
CB0940_05406 CDS
T09388
Name
(RefSeq) Transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
cbet
Cercospora beticola
Pathway
cbet03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cbet00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CB0940_05406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbet03021
]
CB0940_05406
03036 Chromosome and associated proteins [BR:
cbet03036
]
CB0940_05406
Transcription machinery [BR:
cbet03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
CB0940_05406
Coactivators
SAGA/TFTC/STAGA complex
CB0940_05406
Chromosome and associated proteins [BR:
cbet03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
CB0940_05406
STAGA complex
CB0940_05406
TFTC complex
CB0940_05406
SAGA complex
CB0940_05406
SLIK complex
CB0940_05406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
WD40
Beta-prop_THOC3
TFIID_NTD2
Beta-prop_WDR5
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_Aladin
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_SCAP
Beta-prop_TEP1_C
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_VPS8
Tricorn_2nd
LisH
Beta-prop_WDR41
NBCH_WD40
Beta-prop_WDR35_TULP_N
RAB3GAP2_N
Beta-prop_RIG_1st
LisH_PAC1
Beta-prop_DCAF12
WDR54
eIF2A
PROPPIN
PALB2_WD40
Dimer_MINDY4_N
Motif
Other DBs
NCBI-GeneID:
35429214
NCBI-ProteinID:
XP_023456324
LinkDB
All DBs
Position
2:complement(408371..411667)
Genome browser
AA seq
728 aa
AA seq
DB search
MASQPLPPSRTTSVGPSSAGGMGAPPPNAPGGAGGQNNQQQNLNQIVLEYLSKKGYSRTE
AMLRKESANTDANGNIVATSIDEIGGKKYGRAFDLVTNWIDNVLDIYKPELKRLLWPLFV
YSYLQCIGEFYSRDAEEFFTRFRSHFERENPDDLRALSKLYEPEHAQDNAVADLYRNNKY
RLTLSNMAFQTLMMHLESKDNEGGKVITHIISQNLDVRIVDRAAAGTERSLAKMLATRDG
QEDVPAEDEGIPGHNPGSANLDPKAPSVLSKLALGPLPMENDLLEDVKAELQEHDAAHPP
GAGQNSLIDEFEQRIKREETADAAPSRDTLPFPPSTARDVAMEVQRVKENRDRFRIEDKT
GGVGPGVSVTMFTFHNTYDSVNCIEFSGDNCLVAIGSAESYIRVWSLDGQTLTSPTDPPN
FQPSSSRRLIGHSGPVYGLSFSPSIAIPEPQTNGHTNNSTSSDSRPRYLLSCSADCTIRL
WSLDTWTNLVVYKSHNLPVWDVRFSPYGHYFTSCSADRTARLWSTPQIAPLRLFVGHDSD
VDTVAWHPNSAYIFTGSGAPDRTVRMWDISRGQAVRIFTGHVGNVTALACSPSGKILASA
DDRGEILLWDLARGRLVKRMRGHGRGGIWSLDWSIESSVLVSGGADGTVRVWDVQPNKEG
QGKVVGEGGAGAKIDGAATGGAVAKGKSKKDVVVSPDQISAFPTKKSPVYKVGFTQMNLV
VAGGAYLP
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgcagccgttaccgccgtcgcgcacaacgagcgttggaccttccagtgcaggc
ggcatgggcgctcctcccccaaatgcgccaggcggcgcgggcggccagaacaaccaacag
cagaatctgaatcaaatagtacttgaatatctctctaagaaagggtacagccgtaccgag
gccatgctccgcaaagagagtgcaaacaccgacgccaacggcaacatcgtcgccacctcg
atagatgaaatcggcggcaagaagtatgggcgcgctttcgacctcgtcaccaactggatc
gacaacgtcttggacatctacaagccagagctgaagcgtctactctggccactctttgtg
tactcctacctgcaatgcatcggcgagttttattctcgagatgcagaggaattcttcaca
cgttttcggagccacttcgagcgcgaaaatccagatgatttgcgagcgctctccaaattg
tacgagccggagcacgcgcaggacaacgcggtcgcggacctgtatcgcaacaacaagtac
cgcctgacacttagcaacatggctttccaaacgctcatgatgcacttggagagcaaagat
aacgaaggcggcaaggtcatcacccatatcatctcacagaatttggatgtgcgcatagtg
gatcgcgccgctgccggcactgagcggagtctggcgaaaatgctagcaacccgagacggg
caagaagacgtgccggcagaggacgaaggcattcctggtcataatcccggatctgccaac
ctcgaccccaaggcaccttcagtactgtcaaagcttgctcttggtccactacccatggag
aatgacttgctggaggacgtcaaggcagaattgcaagaacatgacgcagcacatccgccc
ggggcaggccaaaactctctgatagatgagtttgagcagcgcataaagcgcgaagagact
gctgacgcggcaccatctcgagatacactccctttcccaccttccacggcacgagacgtg
gctatggaggtgcagagggtcaaggagaaccgtgaccgcttccgcatcgaagacaagact
ggcggcgtcgggcctggtgtgagcgtgacaatgttcacattccacaacacttatgacagc
gtcaactgcatcgaattctccggcgacaattgcctcgtcgccatcggatcggcagagtca
tatatcagagtctggtcactggatgggcagactctgacttcacctactgaccctccgaac
ttccagccatcttcgtcacggcgcttgatcggacactccggcccagtctacgggctttcg
ttttcgccatcgattgctattccagaaccacagacgaatgggcatacgaacaactcgact
tcatcagactcgcgcccaagatacttactatcttgctcagcggactgcactatccgactg
tggtcattagacacatggacaaacttggtggtctacaaatcccacaatctgcctgtctgg
gacgtccgcttctcaccgtatggccactacttcacatcatgctctgcagaccgaacagct
cgactctggagtacgccgcagattgcaccactacggctcttcgttgggcacgactcggat
gtagacacagtggcatggcatccgaacagcgcgtacatcttcacgggatcgggtgcgcca
gacaggacagtgcgcatgtgggacatctcaagaggacaagctgtgcgtatcttcaccggc
cacgttggcaacgtcactgctcttgcgtgctcgccgagcgggaagattctcgccagcgcc
gacgatagaggagagattctgctctgggacctagctcgcggtcgcttggtgaagcgcatg
cgtggacacggtcgaggcggaatctggagtctggattggagcatcgagtcgagcgtgctc
gtctctggcggcgcggacggaactgtccgtgtctgggacgtgcagcccaacaaggaaggc
caaggcaaggtcgtaggcgaaggtggagcgggtgccaagatcgatggcgcggcaacagga
ggtgctgtcgcgaaaggcaagtccaagaaggacgtcgtggtatcacccgaccagatctcg
gcttttccgaccaagaagagtccggtctacaaggtcggcttcacacagatgaatctggtc
gttgcgggcggtgcttatctgccttga
DBGET
integrated database retrieval system
