Cercospora beticola: CB0940_05941
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Entry
CB0940_05941 CDS
T09388
Name
(RefSeq) RNA polymerase II transcription factor B subunit 2
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
cbet
Cercospora beticola
Pathway
cbet03022
Basal transcription factors
cbet03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cbet00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CB0940_05941
09124 Replication and repair
03420 Nucleotide excision repair
CB0940_05941
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbet03021
]
CB0940_05941
03400 DNA repair and recombination proteins [BR:
cbet03400
]
CB0940_05941
Transcription machinery [BR:
cbet03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CB0940_05941
DNA repair and recombination proteins [BR:
cbet03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CB0940_05941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
35429749
NCBI-ProteinID:
XP_023455129
LinkDB
All DBs
Position
2:2114136..2115943
Genome browser
AA seq
487 aa
AA seq
DB search
MSSSAQRALEYLEQLPGTTFTKLYQQPSTALAIFRRMLPHLAKTIVMAMLYLPHPFAASD
LDAWVKPDHQSTQVKERALSILQRLKILYEEQHNGRQAFRLSPAFGKSLRMALTGGGKHN
SFGVPCSEPDKTPVTAEYLDTFARKQWEAILYYVVGSASAGLGAGIEISTGTRTLLEKGR
FVVVKGRSRAITQDGFTFLLQDVNAQIWSLLIVYLEVSADLHMDSVDVLSFLFTLGSLEL
GISYSTSNLTPTQLQMLEDLTDFGLVYRRSPNSDRYYPTRLATTLTSDAPALPNNSFTTT
TSDPNDPASSASEKGYIILETNYRLYAYTSSPLPISILSLFANLHTRYPNLVTAKITKPS
IQTAIASGITSDQIISYLQTHAHPILRRQAAMHSAPILPPTVVDQIRLWQIEGERMKSTK
GFLIREVGTDDDYMKAVQYAEALGILVKEFPHKKSFFVTRMEQMSTYFKSQAARKREAKE
AAAASRS
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcctcggcgcagcgggcgctcgagtaccttgagcaactgcccggaacgaccttc
accaagctgtatcaacagccatcgactgccttggccatcttccgccgcatgctgccgcac
ctggcgaagacgattgtcatggccatgctctacctcccacacccgttcgctgcatcagat
ctggacgcatgggtcaagccggaccatcagagcacacaggtcaaggaacgtgcgctcagc
atattgcaacgactgaagattctgtacgaggagcagcacaatggccgacaggcgtttcgc
ctcagtcctgcgtttggcaagagtctgcgcatggctctgacaggtggcggcaagcacaat
agttttggtgtgccttgttcagaaccagacaagacgcccgtgaccgccgagtacctggac
acgttcgctcggaagcaatgggaggccatcctttactacgtggttggaagtgcatctgca
gggctgggcgcagggattgagatctcgacaggcacgaggactctgcttgagaagggcaga
ttcgtcgtggtcaaaggacggagcagggccataacgcaggacggcttcacattcctgctg
caagacgtcaatgcccaaatttggtcactgctgatcgtgtatctggaagtctcagctgac
cttcacatggactctgttgacgtcctgtccttcctcttcacgctcggctctctggagctg
ggcatcagctattcgacatcgaatctgaccccaactcagctccagatgctggaggacctc
acagactttggtctagtctatcgccgttctcccaactccgatcgctactatccgacacgc
ttggctacaacactcacgtctgacgcgccagcactacccaacaacagtttcacaacgaca
acctccgaccccaacgatcctgcatcgtccgcttccgaaaaaggttacataatcctcgaa
accaactacagactctacgcctacacctcctcgcccttaccaatctccatcctctccctc
tttgccaacctccacacccgctacccgaacctcgtcacagcgaagatcaccaaaccttcg
atccagaccgccatcgcgagcggcatcaccagcgaccagatcatctcctacctacaaacc
cacgcgcatccgatcttgcgtcgccaggcagctatgcactcagctcctattcttccaccc
actgtggtagatcaaatccgtctatggcaaattgaaggcgaaagaatgaagagcactaag
ggtttcttgattcgagaagtcggcacagatgacgactacatgaaagcagtgcagtatgca
gaagctttgggcatcctcgtcaaggagttcccgcataagaagtcattctttgtgaccaga
atggagcagatgagcacgtactttaagagtcaggccgcgaggaagagagaggcgaaagaa
gctgccgctgcgagcagatcgtga
DBGET
integrated database retrieval system
