Cercospora beticola: CB0940_07034
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Entry
CB0940_07034 CDS
T09388
Name
(RefSeq) mRNA cleavage and polyadenylation factor CLP1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
cbet
Cercospora beticola
Pathway
cbet03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cbet00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CB0940_07034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbet03019
]
CB0940_07034
Enzymes [BR:
cbet01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
CB0940_07034
Messenger RNA biogenesis [BR:
cbet03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
CB0940_07034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
ATP_bind_1
Dynamin_N
AAA_16
Motif
Other DBs
NCBI-GeneID:
35430840
NCBI-ProteinID:
XP_023448688
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All DBs
Position
5:887584..889338
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AA seq
480 aa
AA seq
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MSLPGLTLPGLAPPQASATPLASTASIAKPPRIESLQPLHEWRFEVGFKQQYNVKLESGY
AELFGVELAPKQTYTFSGCKGAIFTWQGCQLELSGNAESEYAGQETEYAVEWLNVHGMLE
GMRAPTSSDAPRVLVLGPDFVGKSSLVRNLAAWAVRTGHAPTVVNLDPREGLLAPPGSLS
IVTVDSSLDIDNGYGISSSSGPTVSPVRTPLIYHFPYQSPSEKPEVFKHITTRMALSVTN
RLEENVEAKRSGIIIDTPGSFNDPKSNYDVIAHVVSEFSINMILTIGSERLSSDMSRRFA
STKSPDETVHVLRITKPGGAVERDTEFMKQVRTQSLRQYFFGSSKESLNPHSHTIPFADL
DIYRVRSGAALNTEDPAFGAGDEGDDYDIPYANKPSGNTTYEKVVPSAAMTGGLLAIKFC
SGGADEQTIRDSGVMGFLYAADVDEARKKVRFLAPHPQRWGDRALVWGHGWPEATGDLVG
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaccaggcttaacattacccggtctagctccaccgcaggcttccgctacacct
ctggcaagcaccgcgtcaatagcgaagcctccaaggatcgaatcacttcaacccctacac
gaatggagattcgaggtaggcttcaaacaacaatacaatgtcaaactcgaaagcggctac
gcggaactcttcggcgtagaactggctccaaagcagacgtacacattttctggttgcaaa
ggcgcaattttcacttggcaaggatgtcaattagagctcagcgggaacgctgagagtgaa
tatgctggtcaggagacagagtacgctgtggagtggttgaacgtgcacggaatgttggaa
gggatgcgagcaccgacctcgagcgacgcacctcgagtgcttgttttgggaccagatttt
gtgggcaagagcagtctcgtgcgcaatctagcagcgtgggctgtcagaaccggtcatgca
ccaacagtggtgaacctagatcctcgtgaaggtctgcttgcgccgcctggcagtctctca
attgtgactgtggattcctcacttgacatcgacaatggctatggcatcagttcatcgtca
ggtccaacagtgtcacctgtgcgcaccccgctcatctatcacttcccgtatcagtcacct
tctgagaagcctgaagtcttcaagcacatcaccactcgtatggcactatctgtcaccaac
cgacttgaggagaatgtcgaggcgaagcgaagcggcatcatcattgacaccccaggctcg
ttcaatgacccgaaatcaaactacgatgtgattgctcacgttgtttcggagttcagcatc
aacatgatactcacgataggctccgagagattatccagcgacatgagcagacgatttgct
agcaccaagagcccggacgagaccgtgcatgtactgcggatcacaaagccaggtggcgct
gtggaaagagataccgagtttatgaaacaggttcgaacacaatcgcttcggcaatacttc
ttcgggtcaagcaaagagtcgcttaatcctcactcgcatacgattccctttgcagatctg
gacatatatcgtgtcaggtctggagcagcgctcaacactgaggatcctgccttcggagcc
ggagatgaaggcgacgattacgatattccttacgcgaacaaaccatctggtaatacgaca
tacgagaaagtagtaccgtcggctgctatgactggtggcttactcgcgatcaaattctgc
tctggtggcgccgacgagcagacgattcgagacagtggggttatgggcttcctgtatgcg
gcagacgtagacgaggcgaggaagaaagtgcgcttcctagcaccgcacccgcagcgatgg
ggcgatcgtgctttggtatggggtcacggctggcctgaggcgacgggagatctggttgga
tag
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