Cercospora beticola: CB0940_07377
Help
Entry
CB0940_07377 CDS
T09388
Name
(RefSeq) RNA polymerase II transcription factor B subunit 4
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
cbet
Cercospora beticola
Pathway
cbet03022
Basal transcription factors
cbet03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cbet00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CB0940_07377
09124 Replication and repair
03420 Nucleotide excision repair
CB0940_07377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbet03021
]
CB0940_07377
03400 DNA repair and recombination proteins [BR:
cbet03400
]
CB0940_07377
Transcription machinery [BR:
cbet03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CB0940_07377
DNA repair and recombination proteins [BR:
cbet03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CB0940_07377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
35431183
NCBI-ProteinID:
XP_023448652
LinkDB
All DBs
Position
5:complement(<1758410..>1759594)
Genome browser
AA seq
394 aa
AA seq
DB search
MNEVDATGRSGQRDDGEAPSLLTIILDTNPHAWALLEDSLSLQKVVVNLLVFINAHIAIN
HANRVAVIASHSERAEWLYPTPLQAHSATANGTSNGEDVEMMDDGTAGSGGPVRPPDDAN
KYRPFAHIEHAITTNLRRLVESTSPDALQSTPATMMAGALTRALAYISKQTASLPSGSSS
AQQFNYSDPSSVAGGNEASASSAAGSGPNISGLTSRLLILSVSGDLANQYIPIMNSIFAC
QRLSIPIDILKISGDTIFLQQAADATGGIYLSLSTPELRAGLLQFLMQAYLPDLAARRHL
ILPGEGDSGVDFRAACFCHRRIVDIGFVCSICLSIFCEPSLHDNTCLTCGSYLQMTNYGQ
KPAVVPKPKKKKKKRAPGMDGSGTPDSRAATPMP
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagtcgatgcaacggggcggagtggtcagcgagacgatggagaagcgccatct
ctgttgaccatcatcctggacacaaaccctcacgcctgggcactacttgaagattcacta
tcgctccaaaaggtcgttgtcaacctgcttgtcttcatcaacgctcacatcgccatcaat
catgcaaaccgcgtagcagtaattgcaagtcactcggagcgagcagaatggctttaccca
actcccttgcaagcacattcggcgaccgcgaacggcacttcgaatggcgaagatgtagaa
atgatggacgacggcacagctggcagcggaggtccagtgcggccgccagatgatgcgaac
aagtatcgaccttttgctcatatcgagcacgccattaccacgaacctgcgccgtctggtg
gaaagcacctctcccgatgcactccaatcaactcctgcaactatgatggcgggtgctttg
acccgagcacttgcatacatctctaaacaaactgcgagtctgccatcgggctcgtcttca
gctcaacaattcaactactctgacccgtcctcagtcgctggcggcaacgaagcctccgca
tcatctgccgctggctcgggtcccaacatctctggcctgacatcccgtctactcatactg
tctgtctctggcgacctagcgaaccagtatatccctatcatgaacagtatcttcgcatgt
caacggctctccatccccattgatatcctcaagatctctggagacaccatcttcctccaa
caagccgccgacgcaacaggtggaatctacctctcgctatccaccccagaactccgcgcc
ggactcctccaattcctcatgcaagcctacctacccgatcttgcagcccgtcgacacctc
atactacctggcgaaggggactccggtgtcgacttccgcgcagcatgtttctgccatcgc
agaatcgtggacatcgggttcgtgtgctcgatatgtctcagcatcttctgtgaaccgtct
ttgcacgataatacgtgtttgacatgcggaagctatttgcaaatgacgaattatggacag
aagccggctgttgtgccaaagccaaagaagaaaaagaagaagagagctccgggaatggat
ggaagcggaactccggacagcagagccgcgacgccgatgccttga
DBGET
integrated database retrieval system
