KEGG   Cercospora beticola: CB0940_07481
Entry
CB0940_07481      CDS       T09388                                 
Name
(RefSeq) Histone deacetylase RPD3
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
cbet  Cercospora beticola
Pathway
cbet03082  ATP-dependent chromatin remodeling
cbet03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:cbet00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    CB0940_07481
   03083 Polycomb repressive complex
    CB0940_07481
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cbet03036]
    CB0940_07481
Enzymes [BR:cbet01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     CB0940_07481
Chromosome and associated proteins [BR:cbet03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     CB0940_07481
   HDAC complexes
    Sin3A-HDAC complex
     CB0940_07481
    BRAF-HDAC complex
     CB0940_07481
    REST complex
     CB0940_07481
    SHIP complex
     CB0940_07481
    MiDAC complex
     CB0940_07481
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     CB0940_07481
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    CB0940_07481
  Chromatin remodeling factors
   NuRD complex
    CB0940_07481
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 35431287
NCBI-ProteinID: XP_023448979
LinkDB
Position
5:complement(2068781..2071567)
AA seq 678 aa
MPIGAGGYTPLDAPGTGTNAAPSQPKKVAYFYDSDVGNYAYNAGHPMKPHRIRMAHSLIM
NYGLYKKLEIYRAKPASKYEMTQFHTDEYVDFLQRVTPDNMDNFMKEQGRYNVGDDCPVF
DGLFEFCGISAGGSMEGAARLNRQKCDVAVNWAGGLHHAKKSEASGFCYVNDIVLGILEL
LRFHERVLYIDIDVHHGDGVEEAFYSTDRVMTVSFHKYGEYFPGTGELRDIGVGQGKHYS
VNFPLRDGIDDTSYKGIFEPTIGWVMEYYRPTAVVLQCGGDSLSGDRLGCFNLSMRGHAN
CVNFVKSFNLPTLVLGGGGYTMRNVARTWAYETGQLVGVEMGPDLPFTDYYEYYSPDFEL
DVKPSNMDNANSHEYLEKIKQQVLENLKRTTQHAPSVQMHDVPREPLGMHNSGPDGEPET
FDEREAREDDEEADAEESKDRRWNQRAYDKHTTNDLDDEDSEDEDLNFANGLRKPPAARR
IGIMDTQNVHAPVDDSGANTPADDDARSVNGDGNDEEDGAEEAMQVDGAADVAAANATVA
EAILADKAKSPTPGALTSALTSAPQPKVEQTSNQSEVSAEDAGDEADDEMADAPPAPAAV
SAAVPQVTTPPRSPAAATGAPITADTSGDEKEDVEMKDDAPEPEKLAEKEEAKQEREADD
AKAEATTQIATSDAPPAA
NT seq 2037 nt   +upstreamnt  +downstreamnt
atgcctatcggcgcaggagggtatacacctctggacgcgcctggcactggaacaaatgct
gctccctcgcagcccaagaaagtcgcatacttctacgacagcgacgtcggcaactacgct
tacaatgccggtcatcccatgaaaccgcatcgtatccgaatggcacactcgttgattatg
aactacgggctgtataagaaattggagatctatcgtgcgaagcccgcgagcaagtacgag
atgacccaatttcataccgacgagtatgtcgacttcctgcaacgcgtcacccccgacaac
atggacaacttcatgaaagaacaaggccgatacaatgtgggcgacgactgtcccgttttc
gatggcttgttcgaattctgtggcatcagtgcaggaggaagcatggagggtgctgcacga
ttgaatcggcagaagtgcgatgtcgctgtcaactgggctggaggtctgcatcacgccaag
aagagtgaagcttcgggcttttgctacgtgaatgacattgtcctcggaattctcgaactc
ctgcgatttcacgagcgcgttctatacatcgatatcgacgtgcatcacggcgacggtgtc
gaagaagccttctactccaccgatcgtgtaatgacggtctctttccacaagtacggcgaa
tacttccctggtaccggcgaacttagggacattggtgtaggccagggcaagcactactcg
gtcaatttcccgcttcgagatggtattgacgacacgagctacaagggcatctttgagcca
accattggctgggtaatggaatactacagaccgactgccgttgtccttcagtgtggcggt
gactccttgtccggcgacaggctaggttgcttcaacttgagcatgcgaggacatgcaaac
tgtgtcaacttcgtcaagagtttcaacctccccacactcgtccttggtggaggtggttac
acgatgcgcaatgtcgcacggacgtgggcttacgagactggacaactggtgggtgtcgag
atggggcctgaccttccgttcacggactactacgagtattatagtccggattttgagctg
gacgtcaagcctagtaacatggacaatgccaattcgcacgagtatcttgagaagatcaag
cagcaagtacttgagaacctgaagcgcacaacacagcatgcgcccagtgtgcaaatgcac
gacgtacctcgagagccccttggcatgcacaattccgggcccgacggggagcccgagaca
tttgatgagcgagaagcacgagaggacgacgaagaagcagacgccgaggagagcaaggat
cgcagatggaatcaacgcgcatacgacaagcacaccacaaacgatctggacgatgaagac
tcggaagacgaggacctgaacttcgcaaatggccttcgcaagcctcccgctgcgaggaga
atcggcatcatggatacacagaacgtgcatgctccggtagacgacagcggcgccaacaca
cccgcagatgatgatgcgcgcagtgtcaacggagacggcaacgacgaggaagatggtgct
gaagaagccatgcaggtcgacggcgccgctgatgtcgcggcggcaaatgccactgttgca
gaagcaatcctcgctgacaaggccaaatctcctacaccaggcgcactcaccagcgcactc
accagcgcaccacagcccaaagtcgagcagacgtcaaatcaatccgaagtcagcgcagag
gacgctggagatgaagcggacgatgaaatggccgacgctcctcctgctcctgccgctgtc
agtgctgccgtcccacaagtcacgactcctccccgctcacctgctgctgcgactggtgcg
cccattacagcggatacctcaggggacgaaaaggaagatgtcgagatgaaggacgatgcg
ccggagccggagaagctggccgagaaggaggaagcgaagcaggagcgagaagctgacgac
gcaaaagctgaagcgacaacacagatcgccacgagtgatgccccgcccgcggcttag

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