Cercospora beticola: CB0940_07592
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Entry
CB0940_07592 CDS
T09388
Name
(RefSeq) Nucleoporin NSP1
KO
K14306
nuclear pore complex protein Nup62
Organism
cbet
Cercospora beticola
Pathway
cbet03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cbet00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CB0940_07592
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbet03019
]
CB0940_07592
Messenger RNA biogenesis [BR:
cbet03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CB0940_07592
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
Nucleoporin_FG
ATG16
MscS_porin
Lip_prot_lig_C
DUF6244
DUF3450
LPD34
DUF1664
TACC_C
ACBP4_C
Tropomyosin
AAA_13
HAUS5
Motif
Other DBs
NCBI-GeneID:
35431398
NCBI-ProteinID:
XP_023449837
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Position
5:2412550..2415041
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AA seq
745 aa
AA seq
DB search
MADDKNKPPSFAFGKTSSTPGNLFGSTNTSTSGATPFGSTTQTTSSGGGLFGGGASNTGG
TSLFGNANSASGSSTPTLFGAQTQQTSAQSTGGTPATSGGGSMVHPGSVLFGAATAKKTE
PGSNPFGQPSSQSGSSTPTANKPGGLFGGGTTGSFGASTTPAGEPKQTTSLFGAQSAAST
GGGGNLFGAKPASGGLFGNTQSNTSNTAPSTGNLFGGGQQQSGASTPASTGGSTLFGKPA
TAAPSAPSSGLFGSATAQQSSSGGLSFPSAGGSMLSGANNNTAKPLFGAVTTTSGTSGSG
SSATTAPATGNLFGAGSANTTTASATPATTTTAPSSFFPSSTATSQQTGSTPGGGGLFGA
KPAAASSNTSGATPNLFGNTQSTSNAPASTTPALSLGGLGGNKTTTAAPSSGAPAPSGGL
FGSGPAAAKPASSGNLFSGASTSTSQPATTSTAGTTGGLLGGGGATTTSGSSGGLFGAST
AATSSAPTSSATAASNTAAATAGSGTTSGAPASAAGAVPSGGSRLAHKSLDEVLTMWSTS
LTQHQKTFQNLAQRVSAWDRQLVENSTKISTLYGRCFQAERDCSEVERQLTNVEHTQHEI
EHFLDKYEDEVDKMMQNSGIGEDGIGGVDAERERTYKTAENCAGRLGDLQNSLTDMVDEI
NATSGKLTNNKSLSDDGPNGDPLRQIVSILNSHLVQLQKIGTGAQDLQNKVSSAQREART
LNNSHGLNGGRQWVEDFGASYLGRR
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgataagaataagcctccgagcttcgcctttggcaagacctcctccactcct
ggaaacctgtttggcagcacgaacacaagcacatcaggcgcaacaccattcggtagcaca
acgcaaacaacatcgtcgggcggcggactatttggaggcggcgcatcgaacacaggcggc
acctctctctttggcaacgcgaatagcgccagcggctcgagcacaccaacactcttcggc
gcgcaaacgcagcagacatcagcacaatccacgggcggcacgccagcaacatcaggaggc
ggcagtatggtacatccgggcagtgtgctgtttggcgctgccacggcgaagaagacagaa
cctggcagcaatccattcggtcagccctcgagccaaagcggcagcagcacacctactgcc
aacaagccggggggtcttttcggtggtggcacgactggcagcttcggcgcgtcaacgaca
ccggctggcgaacccaaacagacaacgagcctttttggtgctcaaagcgcggcctctact
ggcggcggtggaaacctttttggcgcaaaacctgcgagcggaggactgttcggcaataca
cagagcaacacgtcaaacactgccccaagcacaggcaatctctttggaggtggacagcag
caatctggcgctagtactccagcgagcacgggtggcagcacactcttcggcaagcctgcc
actgcagcaccctcagcgccgtccagcgggctgtttggctccgctaccgctcaacaaagc
tcatctggcgggttgagcttcccttccgccggcggcagcatgctttcgggcgccaacaac
aacacagcgaagcctctattcggcgcagtaaccacaacttcagggacgtcgggttcaggt
agtagcgcaaccacagctcctgctacaggaaacctcttcggtgcaggatctgccaataca
accactgcttcagccacgccagcgacgactaccaccgcgccaagcagtttctttccatca
tccacagctacctcacaacagaccggatccacgcctggaggcggtggcctttttggagct
aagcccgccgcagcaagcagcaatacatctggcgctaccccaaatctcttcggcaacact
caatctaccagcaacgcaccggcttcaactacgcctgcactttcactgggcggcctaggt
ggcaacaagacgaccactgctgctccgtcctcgggagcccctgctccatctggaggtctc
ttcggcagcggaccagctgctgctaagcctgcgtcgagcggcaatctgttcagtggggcg
agcacttcaacatcacagcccgcgacaacttccactgcgggaactacaggcggtcttctt
ggaggtggcggcgctacaaccacatcgggctcctctggtggtctgtttggtgctagcaca
gcagcaacatcttcagccccgacatcgtcagctactgccgcttcaaacactgctgcagct
acagctggcagcggcacaacaagtggcgcacctgctagcgctgcgggcgctgttcccagc
ggaggctcgcgcctcgcacacaagtctctcgatgaagttctgactatgtggtctacatcg
ctcactcaacatcaaaagacattccagaatctcgctcagcgcgtgagtgcctgggatcgt
cagctcgtggagaacagtacaaagatcagcacgttatatggtcgctgcttccaggctgag
cgtgactgcagcgaggtcgagcgtcaattgaccaacgtcgagcatactcaacacgagatc
gaacacttcctcgacaagtacgaagatgaagtcgacaagatgatgcagaactctggcatt
ggtgaggatgggattggtggcgttgatgctgagcgtgaacgcacatacaagactgctgag
aactgcgccggtcgtctgggtgatcttcagaacagcttgactgatatggttgacgaaatc
aacgccacttctggcaagctcacgaacaacaaatctctgagcgacgatggtccaaacggg
gaccctctgagacagatcgtgagcatcctcaacagccatctcgtgcaacttcagaagatt
ggcacgggcgcgcaagatctacagaacaaggtctcttcggcacaacgcgaggctcgcacc
ctcaacaacagtcatggtttgaatggaggcaggcaatgggttgaggacttcggcgcaagc
tatttgggacgtcggtaa
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