KEGG   Cercospora beticola: CB0940_07770
Entry
CB0940_07770      CDS       T09388                                 
Name
(RefSeq) Exosome complex component SKI6
  KO
K11600  exosome complex component RRP41
Organism
cbet  Cercospora beticola
Pathway
cbet03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cbet00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CB0940_07770
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cbet03019]
    CB0940_07770
Messenger RNA biogenesis [BR:cbet03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     CB0940_07770
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     CB0940_07770
SSDB
Motif
Pfam: RNase_PH RNase_PH_C LppC
Other DBs
NCBI-GeneID: 35431576
NCBI-ProteinID: XP_023448897
LinkDB
Position
5:complement(2823333..2824891)
AA seq 251 aa
MPLDSSTYGLAHLRVDGRRWNELRRISGQMSTQAAADGSSYFEMGNTKIICTVIGPRQQT
RSGGRDQSREASIEVEIGIAGFSGMDRKKRSRSDKRTQEMQYTISSAFASTVFTSFYPQS
TISIVLHVLSQDGALLAACLNAATLALIDAGIPMKDYVAACTTGSTASYAANDDEADPLL
DLNGLEEQELPFLTVGTSGGEDKVNVLVMETKIQMARLEAMLSVGLDGCKQMRLLLDKIV
REHGRKLLKSK
NT seq 756 nt   +upstreamnt  +downstreamnt
atgccgctcgacagctcgacgtacggtctcgcgcatctgcgcgtcgacggaagacgatgg
aacgagctgaggcgcatcagcggtcagatgtcgacacaagcggccgctgatggcagcagc
tatttcgagatgggcaataccaagatcatctgcacagtcatcggtcccagacagcagacg
aggtctggaggacgcgatcaaagtcgagaggcgagcatcgaagtggagattggtatcgcg
ggcttcagtgggatggacagaaagaagaggtcgcgatcagataagcgtacacaggagatg
cagtacacaatctcttccgcatttgcaagcactgttttcacctcgttctatccgcaatct
acgatcagcattgtgcttcatgtgctgtcacaagatggcgccttgctggcggcgtgtttg
aacgcagcgactctggccctcatcgatgctggcattcccatgaaagactatgttgctgcc
tgtacaaccggatcaacagcctcatacgctgcgaacgacgacgaagctgatccattgctg
gacctcaacggacttgaagagcaggagctgccattcttgaccgtcggtactagcggaggc
gaggacaaggtgaatgtactggtcatggagacaaaaatacagatggctagactggaggct
atgctctctgttggcttggacggttgcaagcagatgcgcctgttgttggacaagattgtt
cgcgagcacgggcgcaagctgttgaagtcgaagtga

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