Cercospora beticola: CB0940_09105
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Entry
CB0940_09105 CDS
T09388
Name
(RefSeq) Pre-mRNA cleavage factor Im 25 kDa subunit 2
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
cbet
Cercospora beticola
Pathway
cbet03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cbet00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CB0940_09105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbet03019
]
CB0940_09105
Messenger RNA biogenesis [BR:
cbet03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
CB0940_09105
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
35432910
NCBI-ProteinID:
XP_023450583
LinkDB
All DBs
Position
7
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AA seq
274 aa
AA seq
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MATVPPKFQQSSVPAQELLPFDERQPPTIRLYPLSNYTFGVKETQPEEDPSVKDRLRRLE
EHYEKHGMRRTCEGILVCHEHNHPHVLMLQIANAFFKLPGDYLRHDVDEIQGFKDRLNER
LAPTGSLAESTTAADRDWNIADTLAQWYRPNFETFMYPFLPPHVTRPKECKKLYLIQLPE
GKVLSVPKNMKLLAVPLFELYDNSQRYGPQLSAIPHYLSRYRFEFVDEQGEVVSYTPGGP
INENVRTKILAGGQNGVAAQDDAPKQDEEMAQAA
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggccactgtcccgcccaagttccagcagtcctccgtacctgcgcaggaactacttccc
ttcgacgagcgccagccgcccacgattcgactgtatcctctcagcaactacacgtttggc
gtgaaggagacgcagccagaggaggatccgtcggttaaggaccgcctgcgacgcctcgag
gagcactacgagaagcatggcatgcgtcggacatgcgagggcatcttggtctgccacgag
cacaaccatccgcacgtgctgatgctgcaaattgccaatgccttcttcaagctacctggg
gactacctccgccacgatgtcgacgagatccaaggcttcaaagaccgcctgaacgaacga
ctcgcacccacgggctccctcgccgaatcgacaaccgccgcagaccgagattggaacatc
gccgataccctcgcgcaatggtataggccgaacttcgagaccttcatgtatcccttctta
ccgcctcatgtgacgcgccccaaagaatgcaagaagctgtatctcattcaactgccggaa
ggcaaagttctgagcgtacccaagaacatgaagttgttggcagtcccactcttcgaactg
tatgacaatagccagagatacggtccgcagctcagtgccatcccgcattacctcagccgc
tatcgcttcgagtttgtcgatgagcaaggcgaagtcgtgtcttacacgccgggtggcccg
atcaacgagaacgtgaggacgaaaatcttggctggaggccagaacggagttgcggcccaa
gacgacgcccctaagcaagatgaggagatggcgcaggcagcatga
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