Cercospora beticola: CB0940_09697
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Entry
CB0940_09697 CDS
T09388
Name
(RefSeq) Replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
cbet
Cercospora beticola
Pathway
cbet03030
DNA replication
cbet03410
Base excision repair
cbet03420
Nucleotide excision repair
cbet03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cbet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CB0940_09697
03410 Base excision repair
CB0940_09697
03420 Nucleotide excision repair
CB0940_09697
03430 Mismatch repair
CB0940_09697
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbet03032
]
CB0940_09697
03036 Chromosome and associated proteins [BR:
cbet03036
]
CB0940_09697
03400 DNA repair and recombination proteins [BR:
cbet03400
]
CB0940_09697
DNA replication proteins [BR:
cbet03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
CB0940_09697
DNA Replication Termination Factors
ELG1-RFC complex
CB0940_09697
Chromosome and associated proteins [BR:
cbet03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
CB0940_09697
DNA repair and recombination proteins [BR:
cbet03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
CB0940_09697
Check point factors
HRAD17(Rad24)-RFC complex
CB0940_09697
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_22
AAA_assoc_2
AAA_16
AAA_30
AAA_19
AAA_11
AAA_5
AAA_24
DUF815
RuvB_N
SLFN-g3_helicase
ResIII
DEAD
AAA_3
Mg_chelatase
AAA_14
DNAX_ATPase_lid
PhoH
Sigma54_activat
DnaB_C
AAA_28
AAA_25
NACHT
bpMoxR
AAA_18
AAA_7
ATPase_2
nSTAND3
TniB
IstB_IS21
RNA_helicase
SNF2-rel_dom
ABC_tran
Motif
Other DBs
NCBI-GeneID:
35433502
NCBI-ProteinID:
XP_023450715
LinkDB
All DBs
Position
7:2059791..2061599
Genome browser
AA seq
398 aa
AA seq
DB search
MSDIEDEMDIDAPVKASTADITFSSAANSKGKRSAANLPVEAEDNLPWVEKYRPNSLSDV
SGHHDILATINKFVDSNRLPHLLLYGPPGTGKTSTVLALARRIYGNKNMRQMVLELNASD
DRGIDVVREQIKTFSSTKQIFAGSFDKTQRDDSSIANYKLIILDEADAMTSTAQMALRRI
MEKYTANTRFCIIANYTHKLSPALLSRCTRFRFSPLKDADIRQLVEKVIAEENVNIETTA
IDSLVTLSKGDMRRALNVLQACHASSTPLHIPGQPVKENKDIQRDLITQETIYDCIAAPH
PADIQTIMKTLLNTKNVGSCMNTINTLKKAKGLALADILTALGEQLSEVEVPAQTRVAWM
EGLADIEYRLSGGGSESIQTGGLIGTVRTGVAIKDAKG
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacatcgaggatgaaatggacattgatgcccccgtcaaggcatccaccgccgac
atcaccttctcctccgccgcaaacagcaaaggcaaacgtagcgccgccaacctgcctgtg
gaagcagaggataacctgccatgggtggaaaagtaccgccctaattcgctgtcggacgtg
tcaggtcatcacgatattctcgccaccatcaacaagttcgtcgattcgaatcggctgccc
catctgctgctctacggccctccaggaaccggcaagacgtccactgtgctcgctttggca
cgtcgcatctatggcaacaagaacatgcgccagatggtgctcgagctgaatgcatccgac
gatcgaggcatcgacgttgtgcgggaacagatcaaaacattctcttccaccaagcagatt
ttcgcgggcagcttcgacaaaacgcaacgagacgacagcagcattgccaactacaagctg
atcatcctcgatgaagcagacgccatgacgagcactgcacaaatggcacttcggcggatc
atggagaagtacacggccaatactcgcttttgcattattgccaactatacgcacaagctc
agcccagcactcttgtcgcgttgcactcgatttcgattttcgcccttgaaagacgccgac
atccgccaactcgtagaaaaggtcattgcagaagagaatgtcaacattgaaacgacagcg
attgattctttggtcacattgagcaaaggtgacatgcggcgtgcgctgaacgtcctgcaa
gcttgtcacgcttcatcgactccacttcatatccctggacagccagtgaaagagaataag
gatattcagcgagacctcattacacaggaaaccatatatgattgcatcgctgcgcctcat
ccagcagacattcagactatcatgaagacgcttctgaacacaaagaacgttggcagctgc
atgaacacaatcaatacactcaagaaagcgaaagggctggcactggctgatatcttgact
gcgttgggcgagcagctcagtgaggtagaagttcctgctcaaacccgagtggcctggatg
gaaggtctggccgatatcgaataccgtcttagtggcggtggcagcgagagcattcagact
ggcggtctcatcggcacagtgagaaccggagtggccatcaaggatgcgaagggctga
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