KEGG   Cercospora beticola: CB0940_09697
Entry
CB0940_09697      CDS       T09388                                 
Name
(RefSeq) Replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
cbet  Cercospora beticola
Pathway
cbet03030  DNA replication
cbet03410  Base excision repair
cbet03420  Nucleotide excision repair
cbet03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cbet00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CB0940_09697
   03410 Base excision repair
    CB0940_09697
   03420 Nucleotide excision repair
    CB0940_09697
   03430 Mismatch repair
    CB0940_09697
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cbet03032]
    CB0940_09697
   03036 Chromosome and associated proteins [BR:cbet03036]
    CB0940_09697
   03400 DNA repair and recombination proteins [BR:cbet03400]
    CB0940_09697
DNA replication proteins [BR:cbet03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    CB0940_09697
  DNA Replication Termination Factors
   ELG1-RFC complex
    CB0940_09697
Chromosome and associated proteins [BR:cbet03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    CB0940_09697
DNA repair and recombination proteins [BR:cbet03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     CB0940_09697
  Check point factors
   HRAD17(Rad24)-RFC complex
    CB0940_09697
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 RCF1-5-like_lid AAA_22 AAA_assoc_2 AAA_16 AAA_30 AAA_19 AAA_11 AAA_5 AAA_24 DUF815 RuvB_N SLFN-g3_helicase ResIII DEAD AAA_3 Mg_chelatase AAA_14 DNAX_ATPase_lid PhoH Sigma54_activat DnaB_C AAA_28 AAA_25 NACHT bpMoxR AAA_18 AAA_7 ATPase_2 nSTAND3 TniB IstB_IS21 RNA_helicase SNF2-rel_dom ABC_tran
Other DBs
NCBI-GeneID: 35433502
NCBI-ProteinID: XP_023450715
LinkDB
Position
7:2059791..2061599
AA seq 398 aa
MSDIEDEMDIDAPVKASTADITFSSAANSKGKRSAANLPVEAEDNLPWVEKYRPNSLSDV
SGHHDILATINKFVDSNRLPHLLLYGPPGTGKTSTVLALARRIYGNKNMRQMVLELNASD
DRGIDVVREQIKTFSSTKQIFAGSFDKTQRDDSSIANYKLIILDEADAMTSTAQMALRRI
MEKYTANTRFCIIANYTHKLSPALLSRCTRFRFSPLKDADIRQLVEKVIAEENVNIETTA
IDSLVTLSKGDMRRALNVLQACHASSTPLHIPGQPVKENKDIQRDLITQETIYDCIAAPH
PADIQTIMKTLLNTKNVGSCMNTINTLKKAKGLALADILTALGEQLSEVEVPAQTRVAWM
EGLADIEYRLSGGGSESIQTGGLIGTVRTGVAIKDAKG
NT seq 1197 nt   +upstreamnt  +downstreamnt
atgtcggacatcgaggatgaaatggacattgatgcccccgtcaaggcatccaccgccgac
atcaccttctcctccgccgcaaacagcaaaggcaaacgtagcgccgccaacctgcctgtg
gaagcagaggataacctgccatgggtggaaaagtaccgccctaattcgctgtcggacgtg
tcaggtcatcacgatattctcgccaccatcaacaagttcgtcgattcgaatcggctgccc
catctgctgctctacggccctccaggaaccggcaagacgtccactgtgctcgctttggca
cgtcgcatctatggcaacaagaacatgcgccagatggtgctcgagctgaatgcatccgac
gatcgaggcatcgacgttgtgcgggaacagatcaaaacattctcttccaccaagcagatt
ttcgcgggcagcttcgacaaaacgcaacgagacgacagcagcattgccaactacaagctg
atcatcctcgatgaagcagacgccatgacgagcactgcacaaatggcacttcggcggatc
atggagaagtacacggccaatactcgcttttgcattattgccaactatacgcacaagctc
agcccagcactcttgtcgcgttgcactcgatttcgattttcgcccttgaaagacgccgac
atccgccaactcgtagaaaaggtcattgcagaagagaatgtcaacattgaaacgacagcg
attgattctttggtcacattgagcaaaggtgacatgcggcgtgcgctgaacgtcctgcaa
gcttgtcacgcttcatcgactccacttcatatccctggacagccagtgaaagagaataag
gatattcagcgagacctcattacacaggaaaccatatatgattgcatcgctgcgcctcat
ccagcagacattcagactatcatgaagacgcttctgaacacaaagaacgttggcagctgc
atgaacacaatcaatacactcaagaaagcgaaagggctggcactggctgatatcttgact
gcgttgggcgagcagctcagtgaggtagaagttcctgctcaaacccgagtggcctggatg
gaaggtctggccgatatcgaataccgtcttagtggcggtggcagcgagagcattcagact
ggcggtctcatcggcacagtgagaaccggagtggccatcaaggatgcgaagggctga

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