KEGG   Cercospora beticola: CB0940_10004
Entry
CB0940_10004      CDS       T09388                                 
Name
(RefSeq) Exosome complex exonuclease rrp6
  KO
K12591  exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
cbet  Cercospora beticola
Pathway
cbet03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cbet00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CB0940_10004
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cbet03019]
    CB0940_10004
Messenger RNA biogenesis [BR:cbet03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     CB0940_10004
SSDB
Motif
Pfam: DNA_pol_A_exo1 PMC2NT HRDC DUF6987
Other DBs
NCBI-GeneID: 35433809
NCBI-ProteinID: XP_023450611
LinkDB
Position
7:2863590..2866116
AA seq 775 aa
MEDFGALETGIKSALTSTTRSAVSLANEDIPFQRSLDSAVGPALDQQNARLLGLAERLIG
AATSNTEITRPPRLKDLESVEGNWRAVVDVVDSLLERADTALDEFTGAVKRLSPAAETPK
NAKSSRNAPQRDQRIEKPQLLFEHVPTNNDEAPFKPLLETKPHAKAPLEKEPRIAEGETQ
PTYPHPYQHEIENYEYPARIYQQSEPIMYHPFDETTATFVDTEEALHDMLEELKQAKEIA
IDLEHHDSRSYIGIVSLMQISTRDKDWIVDTLKPWRRKLQCLNEVFADPNIIKVLHGAFM
DIMWLQRDLGLYIVGLFDTHHASRCLGYTGGSLAFLLKKFANVDAQKQYQTADWRVRPLP
KELFDYARSDTHFLLYIFDNMRNELIQRSNFELPDREGDKIYDVLQRSSEEALQRYEYPI
YDAELGQGVGWYKLLSRTPALLGKEQFSVFRAVHQWRDQVAREQDDSTHYIMPNHQIFSI
ARGMPTNRLALLGIATPASQTVRLRADELLSVVIKAKEAGKDGPEMMELLNQVEPQRPRK
MPRETTASASQPGIETAPSASALIVSTDVPIRSTASSFWGAAFESSAWDHTRSAPTASEI
SLAVPLPPLTAESFADASEIERQQPQREPTPEPVPRQQEDDVFILKDTSKKRKRATEPTD
GMAANSDEVAIVDEASVRAQQKAERKAAKRAAKMAAKAAGADASGKDEMQNGDDEVPFDY
ASAPSILNAPSERMSGKDRKKSQKQVNPYAKSMDAPKGLPRSQKEKAGRSMTFKK
NT seq 2328 nt   +upstreamnt  +downstreamnt
atggaagacttcggtgcgctcgagaccggcatcaagtccgccctcacatcgacaacgcgc
agcgcagtatcgttggcgaacgaggacattccgtttcaacgatcactcgactctgctgtg
ggaccggctctggaccagcaaaatgcacgcctgctaggcctcgcagagcgactgatcgga
gctgccacgtcgaataccgagatcacgcgaccgccgaggctcaaggacctcgaatcggtg
gagggtaattggagagctgtggtcgatgtggtggatagtctgctggagcgcgcagatacc
gcgctggacgagttcacgggcgccgtgaagaggttgagtcctgcagcagaaacaccaaag
aacgcgaaatcgagtcgcaatgcaccgcagcgcgaccagcgcattgagaagccacagctt
ctattcgagcatgtgcccaccaacaacgatgaggcgcctttcaaaccgcttctggagacc
aagccccatgcgaaggcgccgctggagaaagagccgcggatagcagagggcgagactcaa
ccaacataccctcacccttatcaacacgaaatcgagaactacgaataccctgcgcgaata
tatcagcagagtgaacccatcatgtaccacccattcgacgagacgacagcgacgttcgtg
gacacggaagaggcgctacatgacatgttggaagagttgaaacaggcaaaggaaatcgca
atagatctggaacatcatgacagcaggtcgtatatcggcatagtgtcgctgatgcagatc
agcaccagagacaaagactggatagtggacacactcaagccttggagacggaaactgcag
tgcctgaacgaagtctttgcggatccgaacatcatcaaagtccttcacggcgcgttcatg
gacatcatgtggcttcaacgagatctggggctctacattgttggtcttttcgatacacac
cacgcttcgcgatgcctgggatatacaggcggtagcttggcattcctgttaaagaagttt
gccaacgtcgatgctcaaaagcaataccaaacagctgactggcgagtgcgacccctgccg
aaagagctgtttgattatgcccgcagcgatacacatttcctactgtacatcttcgataac
atgcgaaacgagctcattcagaggtcgaacttcgagctgccagaccgcgaaggtgataag
atctacgacgtcttgcagcgaagctctgaggaagcattacaacgatacgaatacccgatc
tacgatgcggaacttggtcaaggcgttggttggtacaagttgctttccaggacaccggcc
ctacttggcaaggagcagttctcggtcttccgagctgtacaccagtggcgagaccaggtc
gcacgagagcaagacgacagtacgcattacatcatgccaaaccaccagatcttcagcatt
gctcgcggtatgccgactaacagactggcattgctgggaattgcgacgcctgcctctcaa
acggtacggttacgcgccgatgagcttctcagtgtggtcatcaaagccaaggaagctggt
aaagatgggcctgagatgatggaactgctgaaccaagtcgagccacagcggccgcgaaag
atgccgagagaaactacagcgtcggcctcacagccaggaatcgagactgcacccagtgca
tctgcactgatcgtgtctacagacgttccgattcgaagtacggcttcatcattctggggc
gcggctttcgaaagcagcgcgtgggatcacacacgaagcgcgcccaccgcatcggagatc
tcattggctgtcccattgccccctctgacggcagagtcattcgcagatgcttcagagatt
gagcgacagcagccgcaacgtgagcccaccccggaaccagtacctagacaacaggaggat
gatgttttcatactcaaagacacgagcaagaaacgaaaacgtgccacagaacccacagat
ggaatggctgccaactccgatgaggttgctatcgtggatgaggcttcagtacgtgcgcag
cagaaagcggagaggaaggcagcaaagagagctgcgaagatggcggcgaaggctgctggc
gctgatgcatcaggcaaggacgaaatgcaaaacggagacgatgaggttcctttcgactat
gccagcgcaccaagcatactgaatgcaccaagtgagcggatgagcggaaaggatcggaag
aagtctcaaaagcaggtgaacccttatgcgaagagcatggatgctccaaaggggctacct
cgaagtcagaaggagaaagccggaaggagtatgaccttcaagaagtga

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