Cercospora beticola: CB0940_10254
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Entry
CB0940_10254 CDS
T09388
Name
(RefSeq) putative helicase
KO
K18995
ATP-dependent RNA helicase DHX29 [EC:
5.6.2.6
]
Organism
cbet
Cercospora beticola
Brite
KEGG Orthology (KO) [BR:
cbet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
cbet03012
]
CB0940_10254
Enzymes [BR:
cbet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CB0940_10254
Translation factors [BR:
cbet03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
CB0940_10254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
HA2_C
AAA_22
OB_NTP_bind
DSRM_DHX29
HA2_N
AAA_19
ABC_tran
nSTAND3
RsgA_GTPase
AAA_29
AAA_23
Motif
Other DBs
NCBI-GeneID:
35434059
NCBI-ProteinID:
XP_023454532
LinkDB
All DBs
Position
8:complement(737977..742678)
Genome browser
AA seq
1462 aa
AA seq
DB search
MAAGNKKKKKPAANPARGFATTSVASKPKSDEASEASSAVPSGVATPSAQKAAAGATVEH
ANPAPLPDATRELHELSPEELEAQLEASELQQFVEKHASKVKKETARQVARLQTDKRVLR
GQSDYLGVKAWLPEEVMQQILDLMVSDMKHDTSSHKRSSLPPDDELVAKVWSLRQSLFDL
DLPPARVDEVLQWIIANPPAEPSSGTLWGLEECLEWLALHCLPGELPDYDYTYQKPRVTA
LAAEEAENEPDQAETNGKSSPNKEQSMLANNISKEVDANVPEVEVSDMDSDLEPDELLSV
YLRTKAKLYTLNPQSDNPKSRKGKPSATSVQHSKGTSERKLEEKLQRIEADVLFDKREAD
AHWAGQKIELARETAERKRLQLRDDETATPQRSATPVSETGRVNEDAERLGQEILRETEA
EDGDILSGMFDALPGVSETNGTPASGDQAVNVTVRDFGKITGINPKRVLEEACKARDGRC
KLSYKLVSPTTYMSRHAVTIQWSKQQDAEDVDPKYLTSISASTKAGSTVFTMTAVATPDV
TQSEAYVATAALFVIFSGSPKEEKAHLRLPPAYRNLWDEFSKAKQEHILAEDGSVVREVR
QVIEQYRNMDEDSDDEVVFNASSRRRLDGNSGANTPLSRSDGRQFATPEYSEELQNMWLQ
RTGTAKYQQMLASRMNLPMFHYRQAALDTINKHQVTILCGETGCGKSTQLPAFILENELS
HGRPCKIYCTEPRRISAISLAQRVSEEMGDKKGDVGTPRSLVGYAIRLESQTNAQTRLVY
ATVGIVLRMLENADGINDVTHLVVDEVHERSIDTDFLLIVLKQLMRQRPDLKVVLMSATV
DAQKFSSYLSGAPIIQVPGRTFPVEAQFLEDAIELTGHTNEDATENAVDEESADKTDEDR
SDDPQQLEGYSKKTRQTLASYDEYRIDYSLIVKLVDKIAHLEQYRSFSKAILIFLPGIAE
IRQLNDMLGGHPKFMKGWQIFPLHSTFSSEDQQAAFEVPPEGIRKIVLATNIAETGITIP
DVTCVIDTGKHKEMRFDERRQMSRLIQSFVARANAKQRRGRAGRVQEGLCFHLFTKHRFE
KMMVEQQTPEMLRLSLQDLVMRVKICKLGKVEEALAQALDPPAGKNVRRAIDALIEVGAL
TANEELTSLGTQLAKLPLDAQLGKLILLGSTFGCLDFALTAAATLSSKSPFLSPMHAKRQ
ADTVRLGFKRGDSDLLTVYNAYCTWRKVCTTAGMPEYQFCNKNFLSPQNLGNIEDLKAQL
LSSLADSGVVHLAPEDKQALARLRYHSRKRNFISLPAQYTHSDDNDTMVSSVVAWSFYPK
IIKQDGKGWRNIANNQSLGLHPTSVNKSSLPPQITYLSFYSIMQSSSRFTNAQETTPAAE
IPLVLMAGDARFEIFAGVIIVDGNRLRFKVKNWRTLIVLKILRGKVREVIGKVFKSPGRE
LGDRPRRWMEILEKIFERQKTA
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggggaacaagaagaaaaagaagcccgcggccaaccctgccagaggctttgcc
acaacctctgttgcttccaagccaaagtcagatgaggcatctgaggcgagcagcgcggtc
ccgtctggagttgccacaccttctgcacagaaagccgctgcaggggcaacggtagagcac
gcgaatccagcacctctgccggatgctacgcgagagctgcacgaactgagtcccgaagaa
ctcgaggcacagctcgaagcatcagaattgcaacaattcgtggaaaagcatgcttcaaag
gtcaagaaggagactgcccggcaggtggcacgtctacagaccgacaagcgtgtactgcgg
ggtcaatcagactacttgggagtcaaggcatggttgcccgaggaagtcatgcaacagatt
ctggacctcatggtatctgacatgaagcatgacacatcgtcgcacaagcggtcgagtcta
ccgcctgatgacgagttggtagcaaaggtatggtcgttacgtcagtccctatttgatctc
gatcttcctcctgctcgagtcgacgaggttctccagtggatcatagcaaatccacctgca
gagccctcatcaggtacgttgtggggtctcgaagaatgcctagaatggcttgcacttcac
tgccttccaggagaactaccagactacgactatacataccagaagccaagagtgaccgct
ctggccgcggaagaagctgagaatgagcctgaccaggccgagaccaacggcaaatcctcc
cccaacaaggaacaatcgatgcttgcaaataatatatcgaaagaagtcgatgcgaatgtt
cccgaggtcgaagtcagcgatatggatagtgatctcgagccggatgagctattgtcagtc
tacctcagaacgaaagcaaaactgtacactctcaaccctcagtccgacaacccaaaatct
cgcaagggcaagccctcggccacttccgtccagcatagcaaaggtacatccgagcggaaa
ctcgaggagaaattgcagcgaattgaggcagacgtcctttttgacaagcgggaggcagac
gctcattgggcgggacagaaaattgagcttgctcgtgagacagccgaacgcaagagactt
cagttgcgagatgacgagacagcaacaccgcaaaggtcggcgacacccgtttccgagacg
gggcgcgtcaacgaggatgccgagaggcttgggcaggagattctgcgcgagaccgaagct
gaagacggagatattctcagtggcatgtttgatgctttgcctggagtcagtgagacaaat
ggcacacccgcgtctggcgatcaagctgtcaatgtcactgtacgggactttgggaaaatc
actggaataaatccgaagcgagtgctggaagaggcctgcaaagcacgagacgggcgatgc
aaactcagctacaaattggtctcgcccacgacgtacatgagccgacatgcggtcacgata
caatggtcgaagcagcaagacgcagaggacgtggatccgaaatacttaacgtctatctcg
gcaagcacgaaagcaggaagcacggtcttcaccatgaccgccgtagccacgcctgacgtt
actcagagcgaagcatatgtcgcgactgcggccctgttcgtcatattttccggctccccc
aaggaagagaaggctcatcttcgacttcctccagcttatcgcaatctgtgggacgaattc
tcgaaagctaaacaggagcacattcttgctgaagatggctcggtagttcgagaggtccga
caagtgatcgaacaataccgcaatatggacgaagacagcgatgatgaagtcgtgttcaat
gccagcagccggcgacgactggacggaaacagcggcgccaacactccactttcacgaagt
gatggacgtcaattcgcgacccccgagtactctgaggaactgcagaatatgtggctgcag
aggacaggaacggcgaagtatcagcagatgttggcctctcgcatgaacttgcccatgttc
cattatcggcaagcagccctagacaccatcaacaaacatcaagtcaccattttatgtggt
gagactggctgtggaaagtcaactcagctacccgctttcatccttgagaatgagttgtcg
cacgggagaccgtgcaagatttactgtacggagccacgccgaatatcagccatctcgctg
gcgcaacgtgtctctgaggaaatgggcgacaagaaaggtgacgtcgggacgcctcgatca
ttggtcggctatgccatccgattggaatcacaaacaaacgcccagaccagacttgtctat
gcaactgttggcatagtacttcgcatgctcgagaatgcggacggcatcaatgatgtcacc
catttggttgtcgatgaagttcatgagcgcagcatcgatactgatttcttgctcattgtg
ctcaaacagcttatgaggcagcgaccagatctcaaagtggtgcttatgagtgccacggtc
gatgcgcagaagttctcatcgtacttgagtggggctcccatcatacaagtgcctggaaga
acgttcccagttgaggcacagttccttgaggatgccattgagcttacaggacataccaac
gaagatgcaacagagaacgcggtagacgaagaatcagccgacaaaaccgacgaggacaga
agtgacgatccacagcagttggaaggctacagcaagaagacccggcagacacttgcttcc
tacgacgagtatcgtatagattacagcctaattgtcaagctggtcgacaagattgcgcat
ctggaacaatacaggagcttcagtaaagctatcctgatatttctacctggaattgccgaa
attcgccagctcaacgacatgcttgggggacatcccaaattcatgaagggctggcaaata
ttccctctgcattcgacgttctccagcgaggaccagcaggctgcgttcgaggtaccacca
gagggtatacgaaaaattgttctcgcaaccaacatcgctgagactggtatcaccatcccc
gatgtgacgtgcgtgatcgataccggcaaacacaaagagatgcgtttcgatgaacgccga
caaatgtcgcgtctcatacagagctttgtcgcaagagccaatgcaaaacagcgccgtggt
cgtgctgggcgagtgcaagaaggtctctgcttccaccttttcaccaagcatcgctttgag
aagatgatggtcgaacagcagactccggagatgttgcgtctgtcgctccaagatctggta
atgcgtgtcaaaatctgcaagcttggtaaagtcgaagaagcacttgcacaagctcttgac
ccacctgcaggaaagaatgttcggcgagccatcgatgctctcattgaggtcggcgcattg
actgcgaatgaagaacttacctctctaggcactcagcttgctaaactccctctggatgca
caacttggcaagctgatcttgctcggcagcacattcgggtgtcttgattttgctttgaca
gcagctgccacattgtcatcaaaatcgcctttcttgtcgccaatgcatgccaaacgacaa
gctgataccgtccgcctcggcttcaaacgaggcgactcggatcttctcacagtctacaac
gcctactgtacttggcgtaaggtatgcaccacagctggcatgcccgaatatcagttctgc
aacaagaacttcctcagcccacaaaacctggggaatattgaagatctgaaggctcagctc
ctcagctccctcgcggactctggcgtcgttcaccttgctccggaagacaaacaggcactt
gctcgcttgcgctaccacagtcggaagcgtaacttcatctcactgcctgcacaatacact
cattcggatgataacgacaccatggtatcctctgtggtggcttggagtttctaccccaag
atcatcaagcaagatggaaagggctggcgcaacatcgcgaacaaccaatcccttggtctg
caccccacatctgtcaacaagagctcgttgccccctcagatcacctatttgtccttctac
agtatcatgcaatcgtcttcgcgcttcacaaacgcgcaagaaacgacgcctgctgcagag
attcctcttgtcttaatggctggagatgcgagattcgaaattttcgcaggtgtcatcatt
gtcgatggaaaccggctacggttcaaggtgaaaaattggaggacattgattgtgttgaag
atcttgagaggaaaggtgagagaagtgattgggaaagtcttcaagagtccgggaagagag
ttgggagatcggccgaggagatggatggagattttggagaagatctttgagaggcaaaag
acggcttga
DBGET
integrated database retrieval system
