Cercospora beticola: CB0940_10701
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Entry
CB0940_10701 CDS
T09388
Name
(RefSeq) DNA mismatch repair protein msh-2
KO
K08735
DNA mismatch repair protein MSH2
Organism
cbet
Cercospora beticola
Pathway
cbet03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cbet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CB0940_10701
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbet03400
]
CB0940_10701
DNA repair and recombination proteins [BR:
cbet03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
CB0940_10701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
AAA_27
DUF7809
Motif
Other DBs
NCBI-GeneID:
35434505
NCBI-ProteinID:
XP_023454636
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Position
8:complement(2154244..2157089)
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AA seq
926 aa
AA seq
DB search
MGSRPELKVDDEAGFVKTFHQLETSKPTDTIRIFDRGDFLSAHGDDAEFIARVQYKTTSV
LKTLGRNPGLPSVTMTVTVFRTFIREAIFRLGRRIEVLETSGRNQWKVTKQASPGNLQDI
EDDLGGHVESAPIILSVKVSAKANEGRNVGVCFADASVRELGVSEFVDNDIYSNFESLII
QLGVKECLIQTDITKKDAEIQKLRIIADNCNCAVSERPAGDFGKQDIEQDLTRLLRDEKA
TGTLPQTDLKLAMGSAAALIKYLGIMSDPSNFGQYQLYQHDLSQYMKLDSSALKALNLMP
GPKDGSKTMNLYGLLNHCKTPVGSRLLAQWLKQPLMSLEEIEKRQQLVEAFVNNTELRQT
LQEEHLRSIPDLYRLAKKFQRKKANLEDVVRAYQVAIRLPDFIGTFEGVMDEAYKDALDA
VYTNKLREYSDSFVKLQEMVETTVDLEALDNHEFIIKPEFDDTLRVIRKKLDKLRYDIDR
EHQRVGDDLGMDTEKKLLLENHRVHGWCLRLTRTEASVIRGKKQYPEIATQKNGTYFTTP
KLTEMRREFDQLSDNYNRTQSGLVHEVVNVAASYCPVIEQLAGVLAHLDVIVSFAHVSVH
APTAYVRPKMHPRGTGSTILKEARHPCMEMQDDIQFITNDVSLTRESSEFLIITGPNMGG
KSTYIRQIGVIALMAQIGCFVPCSEAELTLFDCILARVGASDSQLKGVSTFMAEMLETSN
ILKTATKESLVIIDELGRGTSTYDGFGLAWAISEHIIKEIGAFSMFATHFHELTALVDTY
PQVQNLHVVAHIGDGSEDVSMNGDAANSRRREVTLLYKVVPGISDQSFGIHVAELVRFPQ
KVVNMAKRKADELEDFSGKNEQLNVQASKEEVEEGSKLLKELLKQWKEQVEAEGLGKEQQ
VQRMKDLVQGNEQLLANPFFQSVKAL
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgggttcaagaccggaactgaaggtcgacgacgaggctggcttcgtgaagaccttccac
caactagagacgagcaaacccacagacaccattcggatattcgatcgtggggattttctg
tcagctcatggcgatgatgcagagttcatcgcccgagttcagtacaagaccacatcggtg
ctcaagacattgggcagaaatccgggtcttccttcagtcaccatgacagtaacagttttc
cgcacattcatccgagaagccatcttccgcttaggaagacgaatagaagtgctggagaca
tctggaaggaaccaatggaaggtgacgaagcaggcatcgcctggtaatctgcaagatatc
gaagacgacctcggtggccacgtcgaatctgcaccgatcatcttgtcagtcaaagtttca
gcgaaggccaatgagggacgcaatgtgggcgtgtgtttcgctgatgccagtgtccgcgag
cttggtgtcagcgaattcgtggacaacgatatctactcaaattttgaatccttgatcatc
caactcggcgtgaaagagtgcctaatccagactgacatcaccaagaaggatgccgaaata
caaaagctgcgaatcatcgctgacaactgcaattgtgcggtgtcagagcggccagccggt
gactttggaaagcaagacatcgagcaagacctcacgcgactgctccgggacgagaaggct
accgggactctgccacaaacagatctcaagcttgcaatgggatcagcggctgcactgatc
aagtatctcgggatcatgtcagatccgagcaattttgggcaatatcagttgtaccagcac
gatctcagccagtatatgaagctcgattcctcagcactcaaagctctgaacttgatgccc
ggaccgaaggacggctctaagacaatgaatctgtatggattgctcaatcactgcaagacg
cctgttggcagccgactgctcgcacaatggctcaaacagcctctgatgagcctcgaggag
atcgagaagagacagcagctggtggaggcattcgtgaacaacactgagctacgacagacg
ctgcaagaagagcatctccgatcaataccggacctgtaccggttagcgaagaaattccag
cgcaagaaagcaaatctcgaagacgttgttcgagcttaccaggtggctatccgcttgcct
gatttcatcggcactttcgagggcgtcatggatgaggcatacaaagatgctctggacgca
gtctacaccaacaagctgcgagagtattcagacagctttgtgaaattgcaggagatggtc
gaaaccacagtggacctggaagcgctcgacaaccacgaattcatcatcaagcctgaattt
gatgatactctccgtgtcatccgcaaaaagctggacaagcttcgctatgacattgatcga
gagcaccagcgtgtcggcgatgacttggggatggatactgagaagaagcttctcctcgag
aaccatagagttcacggctggtgtctgcgattgacaagaacagaggccagcgtcatccga
gggaagaagcagtatcctgagattgccacgcaaaagaacggaacctatttcacgacacca
aagctcacggagatgagacgcgagttcgatcagctgtccgacaattacaacagaacacaa
agcggactggttcacgaggtggtcaatgttgcagcatcatattgtccagtcattgaacaa
ctcgctggtgtcctcgctcacctcgacgtgatcgtaagctttgctcatgtttcagttcac
gcgccgaccgcgtacgtgcggcccaagatgcatcctcgaggcaccggcagcacaattctg
aaggaggcccggcatccttgcatggaaatgcaagacgacattcaattcatcacaaacgac
gtctcgctcacacgcgagagctccgaatttttgatcatcactggtcccaacatgggcggc
aagtcgacgtatattcggcagatcggtgtcattgccttgatggcacagatcggctgcttc
gttccatgctcagaagcagagctgacgctcttcgattgtattctagcacgagtcggagca
agcgacagtcagctgaaaggtgtcagtacattcatggccgaaatgctggaaacttccaat
atcctcaaaacagccaccaaggaatcactcgtcatcattgacgaacttggtcgaggcacg
agtacatacgacggtttcggcctcgcgtgggctatcagcgaacacattatcaaagaaatt
ggtgctttcagcatgttcgctacccacttccacgagctcacagcactggtcgatacctat
ccgcaagtccaaaacctccacgtcgttgcccacattggcgacggctcagaggatgtgagc
atgaacggtgatgcagctaacagccgacgccgtgaagtcactctgctgtacaaagtcgtt
cccggcatctccgatcagtctttcggtatacacgtcgccgagctcgtccgctttccgcaa
aaggtcgtgaatatggcgaagcggaaagctgacgagttggaagacttttcgggcaagaac
gagcagctcaatgtacaggcgagcaaggaggaggtggaagagggaagtaagctgctgaaa
gaacttttgaagcagtggaaagagcaagtcgaagctgaggggctaggcaaggagcagcaa
gtgcagagaatgaaagatcttgtgcaagggaacgaacagttgctggcgaatccgttcttt
cagagcgtgaaggcactgtga
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