Cercospora beticola: CB0940_11604
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Entry
CB0940_11604 CDS
T09388
Name
(RefSeq) ATP-dependent RNA helicase rok1
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
cbet
Cercospora beticola
Brite
KEGG Orthology (KO) [BR:
cbet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cbet03009
]
CB0940_11604
Enzymes [BR:
cbet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CB0940_11604
Ribosome biogenesis [BR:
cbet03009
]
Eukaryotic type
90S particles
Helicases
CB0940_11604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
T4SS-DNA_transf
Motif
Other DBs
NCBI-GeneID:
35435408
NCBI-ProteinID:
XP_023460525
LinkDB
All DBs
Position
10:21033..23493
Genome browser
AA seq
706 aa
AA seq
DB search
MDPLKLLSRSIKRSKTGTVQRSTPSSGQNAAPQLFPVKAEAVAPGSKKRKRGGDMIDDAS
AELDFFGSGRSNAKGESPAASAKQSAVAKQTDEGEKDNSAPTSYRLPEGERKNVLRQHKL
KVTWLNPPAVEDKARSKGKEKGDKKQAKAEKLSIYPQPLQTFSELREIYGVSARIASNVE
DQGYSMPTEVQLGAIPLLLESPSALLSTTGVPSATEHSHVDLLTVAPTGSGKTLAFAIPL
MHRLHQIKRERNDTPRSISSIILAPTKELASQIVNECKKLARNTGLRVTQVRKGMKLAMS
TTSTHDSEDEDDQPPDIGKPSGTAVKADILVSTPGALAGIVQGLPHDQSEALSNVQHLIL
DEADVLLDPLFREQTLAIWNGLPHPDLRVSLWSATMGSNIEELAQSIMQERRARIAQGDD
DAAAAVPLLRLVVGLKDSAVPNVEHKLVYSASEQGKLMGLRNLLHPATSSTESGPPLLPP
FLVFTQTIERAVALHSELLYDIPAEAGGISRIAVLHSDLSDAARDTVMTKFRRGEVWVLI
TTDLLSRGVDFRGVNGVVNYDIPTSSAAYIHRVGRTGRAGREGGVAVTLFSQEDIPYMKP
IANVVSMAQKQKGNPDTGVQKWLLDALPDLNKKAKQDLKKHGVETRTARGMNKDPRAARK
AKISTKAGFVRRQENKRRGAILGSRRRRDAASAEPNDQGADFDGFD
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggatcctctcaaattgctgtcgcgatcaatcaaacgctcaaagacgggaacggtgcag
cgcagcacaccatctagcggccagaatgcagcacctcagcttttcccagtgaaagccgaa
gctgtcgcaccaggctcgaaaaaacggaagcgagggggcgacatgatcgatgatgcttcc
gcagagctggacttcttcggtagtggacggtcaaatgcgaaaggcgaatctcctgcggcg
tccgcaaagcagagcgcggtggcaaagcagaccgacgagggcgagaaagacaattcagca
cccacttcgtatcgattgcccgaaggagagcgcaaaaatgtgctgcgccagcacaagttg
aaggttacgtggctcaacccaccagcagtcgaggacaaggcacgctcaaaggggaaagag
aaaggtgacaagaagcaagcgaaagccgaaaagctgtcgatatatccacagccattacaa
accttctcggagcttcgagagatatatggcgtctcagctagaatcgcaagcaatgttgaa
gaccagggctattccatgccaacagaggttcaactcggggcaatcccacttttgttggaa
tcacccagtgcgcttttgtccactactggcgttccgtctgccacagaacacagtcatgtt
gacctgttgacggtggcacctacaggcagcggaaagacgcttgcttttgccatacctcta
atgcataggcttcaccaaatcaagcgcgagcgcaatgataccccgagatctatctcctcc
attatccttgctcccactaaagagctcgccagtcagatagtgaacgagtgcaagaagctt
gctcgcaacactgggttgcgcgtgacacaggttcggaagggaatgaaattggccatgtcc
actacgtcaacacatgacagtgaagacgaagatgaccagcctccagacattggaaagcct
tctggaactgcagtaaaggccgatatccttgtctcaacgcctggagcgctcgctggcatt
gtccaaggtctgccacacgaccagtccgaagcactctcaaatgttcagcacctgattctt
gacgaggccgacgtcttgctggacccgctgtttcgcgaacaaacgttggcgatctggaat
ggtctacctcatcctgacttgcgagtcagtttgtggtcagcgaccatgggaagcaacatc
gaagagctggcacagtcgattatgcaagagcgacgcgctcggattgcgcagggagacgac
gacgccgccgctgcagttccccttctacgactcgtggttggtctgaaggactcggccgtg
ccaaacgtagagcacaagttggtgtattcggcttcggagcagggcaaactcatgggtctc
cgcaacctcctgcatcctgccacaagttcaacagaatctggacctccattactgcctccg
ttccttgttttcacgcaaactattgaacgtgccgttgcactgcattcagaactgctttac
gacatacccgcggaagctggcggcatcagtaggattgctgtgctacactcagacctctcg
gatgcagcacgcgatactgtcatgactaaattccgcagaggggaggtctgggtcctgatc
acaacagatctcctgtcgcgaggcgtggatttccgtggcgtgaacggggtggtcaactat
gacatccccacgtcgagtgcagcatacatccatcgcgtgggacgcactgggcgagccgga
cgcgagggtggcgtggccgttacactgttcagccaagaagacataccatacatgaaacca
atcgccaatgtggtctcaatggcgcagaagcagaagggcaatccggacactggggttcag
aaatggttgcttgatgcgttgccagatctcaacaagaaagcgaagcaggatctgaagaag
cacggggtggaaacgagaactgcccgaggcatgaacaaggatccgcgagcagctcgcaaa
gccaagatcagcaccaaagctggctttgtacgacgacaagagaacaaacgacgtggtgca
atcctgggcagtcgtcgacgacgagacgcggcatcggctgaaccgaacgatcaaggcgca
gactttgatggtttcgattga
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