Cercospora beticola: CB0940_11787
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Entry
CB0940_11787 CDS
T09388
Name
(RefSeq) U3 small nucleolar RNA-associated protein 15
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
cbet
Cercospora beticola
Pathway
cbet03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cbet00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CB0940_11787
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cbet03009
]
CB0940_11787
Ribosome biogenesis [BR:
cbet03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CB0940_11787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP15_C
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
WD40_Prp19
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_Vps41
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_NUP159_NUP214
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
35435591
NCBI-ProteinID:
XP_023460656
LinkDB
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Position
10:complement(500312..502595)
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AA seq
551 aa
AA seq
DB search
MAAEVKPVAPIRSAPGPAPETVDTTYWKTFKNQLLLPSPHNAGITSITVPDYNPSGSQAD
TFAITSGSRVQTYSTKTRKLVKTISRFGVDDTARSGVLRRDGRIVLAGGDSGIIQAFDTG
SRAILRQWRGEHAHKQPVHIVRWSPSVLTDLMSCSDDRTVRVWDLTEDAAKWTGIGHDDY
VRTGGYLPGHGGNMLVSGSYDQTVRIWDTRQNGGRSALTFKFGNKVEDILSLNSASLAVA
AGNEVSIVNLVAGQAEHVIRSHQKDVMALSSAQNGTRILTGALDGHVKVHNTASWEVVAA
FKYPSPILSLAVVPGAANSDGERDDRHLAVGLQSGLLSLRTRLAGAEKAKVREREKKMAA
LVAGEADEYERKQKKKDMRQGIRARDRGKDFKGEGADIVITGNDRPRQKKLKSWQKNLRA
GEYAKALDEILPVSGSKQHSRDELMTLITVLRHRSALRTALAERSAYRLLPIMTMVHRYV
GHPQYINLMYDVLLVILDLYSHKLGDWQMDDGSEKDVVALIHKIKAKVRQAADWATAAHR
TLGMVDVLESG
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgaggtgaaacccgttgcacccatacgatcggctccgggtccagcgccagag
acggtcgacacaacatattggaagacattcaagaatcagcttctgctcccatcgcctcac
aacgccggtatcacgtccatcaccgttcccgactacaacccttcaggctcgcaagcagac
acttttgcaatcacgagtggtagcagagtacagacgtacagcactaagacgagaaaattg
gtcaagacaatcagcagattcggcgtggacgacacagcgcgatcaggtgttctgaggcgc
gacggccgcattgtgcttgcgggaggcgacagtggcatcatacaggccttcgatacagga
tcacgcgctatcctgagacaatggcggggcgagcatgcacacaagcaacctgtgcatatc
gtgcggtggagcccaagcgtgctcacagacttgatgagttgcagcgacgaccgaacggtg
cgcgtatgggacttgactgaagacgctgcaaagtggactggaattggacacgatgactat
gtgcgcactggcggctacttgccaggccatggcggaaatatgctcgtcagtggcagctac
gaccagacagtgcgtatttgggacacgagacagaacggcgggcgatcggccttgaccttc
aagtttggcaacaaggtcgaggatatactctccctcaacagcgcaagtctagcagtcgcg
gcgggcaatgaagtctccatcgtcaatctggtagcgggacaggctgagcatgtgattcgt
tcccaccaaaaggatgtcatggcactttcttcggcgcagaacgggacgcgcatattgacc
ggagcgttggatggccatgtcaaagtgcacaacaccgccagctgggaggtcgtcgccgct
ttcaaatacccgtcgcccattctgagtctggcggttgtgccgggagcagctaatagcgat
ggcgaacgagacgataggcatctggcagtcggacttcaaagcggcctgctgtcactccga
acacgattggcaggcgcggaaaaggcgaaggtgcgagagagagaaaagaagatggcggct
ttggtggcaggcgaggcggacgaatacgagcggaaacaaaaaaagaaggatatgcgacag
ggcattcgggcgcgcgatcgaggcaaagatttcaaaggcgagggcgccgacattgtcatc
actggcaacgaccgcccgcgccaaaagaagctgaagtcctggcaaaagaacttgcgtgca
ggtgaatatgcgaaagcactggatgagatcctgccggtgtccggctctaaacaacacagt
agagacgagctcatgaccttgatcacagtcttgagacatcggagtgcactgcgtacggca
ttggccgaacgttcggcataccggctcctccccatcatgaccatggtgcacagatatgtc
ggtcatccacaatacatcaatctgatgtacgatgttctgctggtcatcttggatctttat
agtcacaagcttggcgattggcagatggatgatggcagcgagaaggatgtcgttgctttg
atacacaaaatcaaggctaaggtcaggcaagcggccgattgggccacagctgctcaccgc
acattgggtatggttgatgtgctcgagtcgggttga
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