Cercospora beticola: CB0940_12086
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Entry
CB0940_12086 CDS
T09388
Name
(RefSeq) Transcription elongation factor spt6
KO
K11292
transcription elongation factor SPT6
Organism
cbet
Cercospora beticola
Brite
KEGG Orthology (KO) [BR:
cbet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbet03021
]
CB0940_12086
03036 Chromosome and associated proteins [BR:
cbet03036
]
CB0940_12086
Transcription machinery [BR:
cbet03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
CB0940_12086
Chromosome and associated proteins [BR:
cbet03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
CB0940_12086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
Spt6_S1
SPT6_acidic
Tex_central_region
HHH_9
HHH_3
SH2
Motif
Other DBs
NCBI-GeneID:
35435890
NCBI-ProteinID:
XP_023460431
LinkDB
All DBs
Position
10:complement(1511952..1516654)
Genome browser
AA seq
1431 aa
AA seq
DB search
MADFFDTTAAVGSDDEEEEFDEETGEVVSKKQKPANGADMDDSSEEEEDDDDEEAQRIRE
GFIVDEDEDEDEEAKRERRRERKKRRREEREHEEELDEEDLDLIGETLPDERRRPEQQSK
FKRLKRGHRDNRDISESRGVEDIFSDEEDGDGDMGPPRRAFGAYDDEMDGFIEQDEFPDE
DAGQMDEDLGVRAPRRAGVPDFNNLKDSGLGEAELEDMMNAFGDGQEFVWALEAEKDRNE
ESIDPDKPLELKDVFEPSQLEERMLTDKDNEIRLNDVPERFQLARAPYKDLNDLTDEQIA
VRNAEEASWISSILFPRKRMEPNLRGPFEAAVKQVLQFMNVDDLEPAFIFQNRKDYLIHS
EQVPNDDPNGPPFTIKAEKLLNQTDLWDVFEQDLKYRAFAERRDAIQRNVELLREIEPDF
NDEIFNDLLPLAAQLDDLQDLQDYLNFQYSLQLKDLSIADAEANGTLKRAGTGARTQWDK
VRSGPAYHLVRAFGITADGVAQNAENQAVGRRRYTEDPDRSPEDIADSLIRDPDYKTGED
ILQSAKSMFVEEILVSPRMRRHMRKIYYDNLVFDCHRTEKGMKQINDQHPYYEFKYLRNQ
EVRYFLVEKPELFLRMLKAEAEGLVNVRVKLRGEKRIKTELQKAIESDNFSAVADAWNTL
RREVLDTAVTKMHKIISKGVKDNLKNECENKIGGYCRDAFTQKLDQAPYKPKGMELGTYA
RILALSHGDGNRGDAICWAFVDETGAVKENGKWADLRPGKEEKYIPDGKDIENLKDVVQR
RNPDVIAVSGFSVETYKLYQDLKDIVRKHELHGPTYEDPDEDREVTDPLDVVIPQDEVAR
LYRNSDRSAIEHPGLPPLTRYCVALALYMQNPLKQYAALKKDITSITFDPNQNLLPEDKL
RRYLDTAMVDIVNLVGVDVNEAVHDPYTANLLPYVCGLGPRKADNLIKAVGHNGGDVVNR
SDLVGDLDRHLRPAVGPKVFTNCASFLYLIWNDDPEADYLDNTRIHPEDYDLARKIAADA
LELDEEDIKAETDDNGLGAVVRRLVKEDQQDKVNDLELEQYAKQLEDRFQQKKRATLETI
RAELQNPYEELRRNWNSLTTDELFTQLTGETRESLMDGMIVPVSVKRTFQDHIEVKLDCG
IDGGISETEYPEDMVRQQIEPRRMWSAHQVIQAKLSFIDRKKFTAQLTLRESELRKPFRR
NFDHGLDEWDDMQEEQDQKAMKKAIESKTGRQVRVIKHPLFRPFNSQQAVEALQSQNRGD
CIIRPSSKGTDHLAVTWKVAEGVYQHIDVLEMNKENEFSVGKVLKVGKANYSDLDELIVL
HVQAMAKKVDEMTNDERFQNGTKEQTEQWLTTYTEANPKRSMYAFCLNRQYPGYFYLCFK
AGFNAPLAHWAVKVIPQGFELRGNKYPDVRALKNGFKLIMSNMATQNGGRR
NT seq
4296 nt
NT seq
+upstream
nt +downstream
nt
atggctgacttcttcgataccactgctgcggtcggctcggacgacgaggaagaggagttc
gatgaggagactggcgaagtggtctccaaaaaacagaagccagcaaatggcgcggacatg
gacgactcgagcgaagaagaggaagacgatgatgacgaggaggcgcagcgcatccgcgaa
ggcttcattgtggatgaagatgaggacgaggatgaagaggccaagcgggagcggagacga
gagcgcaagaagcgacgacgcgaggagcgcgagcacgaggaagagctcgacgaagaagat
ctggatctgatcggcgagactctacctgacgagcgtcggcgaccggaacagcagagcaag
ttcaagcgactgaagcgcggccacagagacaatcgagacattagcgaatctcggggcgtg
gaggacatattctcagacgaggaagatggtgatggcgacatgggtcctccccgccgcgcc
tttggtgcctacgacgacgagatggacggcttcatcgagcaagatgaattccccgatgaa
gacgctgggcaaatggacgaggacctgggtgttcgcgcaccgcgtagagctggcgtaccg
gacttcaacaacctcaaagattcagggcttggcgaagcagagctcgaggatatgatgaat
gctttcggcgacgggcaggaattcgtctgggcacttgaagcggagaaggacagaaatgaa
gaatcgatcgatccagacaagccactggagcttaaggacgttttcgagccgagtcaactg
gaggagcgcatgctcacggacaaggacaacgagattcgtctcaacgatgtgccggagcgc
ttccaactggcccgtgcgccgtacaaggacctgaacgacttgacggatgagcagatcgca
gttcggaacgccgaagaagcaagctggatctcgagcattctgttccccaggaagcggatg
gagccaaacttgcgaggaccattcgaggctgcagtcaagcaggtactgcaattcatgaat
gtggacgaccttgagcccgcatttatctttcaaaaccgcaaagattatctcatccactcc
gagcaggtgcccaatgacgaccctaatggaccgcccttcacgatcaaagccgagaagctt
ctaaaccagactgatctctgggacgtgtttgaacaggacctgaaataccgggcatttgca
gagagaagagacgcaattcagaggaatgtcgaattgctcagagagattgagcctgacttc
aacgatgagattttcaacgatcttcttccactggctgcacagctggacgatctgcaagac
ttgcaagattacctcaattttcaatactcacttcagctgaaggacctcagcattgctgat
gcagaggcgaatggcacactgaagcgcgcaggcactggcgctcgcacccaatgggataaa
gtacgttcaggaccagcgtatcaccttgttcgagccttcggaattacagcagacggcgta
gcgcagaacgctgagaatcaagctgttggtcgacgacgatacacggaagatccagaccgc
tcgcctgaggacattgccgactcactcattcgagatccggactacaagactggcgaagat
attctccagtcagctaagtccatgttcgttgaggagattctggtgagcccgcggatgcgt
aggcatatgcggaagatttactacgacaatctggtcttcgactgtcatcgtactgagaag
ggcatgaagcagatcaacgatcaacacccctactacgagttcaagtacttgcgcaatcag
gaagtccgctacttcctcgttgagaagccggaactgttcttgcgtatgctcaaagctgag
gcagaaggactcgtgaacgtgcgggtcaaactgcgcggcgagaagcgcatcaaaacagag
ttgcaaaaggctatcgaatccgacaacttttcagcagtcgcggacgcgtggaatacgttg
cgacgagaagtccttgacactgccgtaacgaagatgcataagatcatttcaaagggcgtc
aaggataatctcaagaacgaatgtgagaacaaaatcggtggatattgccgagatgctttt
acacagaagctcgaccaagcgccatacaagccgaaaggaatggaacttggaacgtacgcc
agaattctcgctttgtcacacggcgacggaaaccgcggcgatgccatctgctgggccttt
gttgacgaaactggtgctgtgaaggaaaatggcaagtgggctgatcttcgacctggaaag
gaagagaagtacattcccgacggcaaggacattgagaacctgaaggatgtggtgcaacgt
cggaatcccgatgtgatcgcagtatccggcttctctgtcgagacgtacaagctctatcag
gacttgaaggacatcgtgagaaagcacgagctccacggtcctacatacgaagatccggac
gaagaccgcgaggtcacagacccgctcgatgtcgtgattccgcaagatgaggttgcccgc
ctgtatcgcaattcagatcgttctgctatagaacatcctggactgccacccctgacacga
tactgcgttgccttggcactctacatgcaaaatccgctgaagcaatacgcggcgctcaag
aaggacatcacttccatcacgttcgatcccaaccaaaatctcctacctgaagataagttg
aggcgatatctcgacaccgcaatggttgacattgtcaatcttgttggtgttgacgtgaac
gaggcagtccacgatccgtacactgccaatctgcttccctacgtttgtggactaggcccg
agaaaggccgacaacttgatcaaagctgtgggccacaatggcggcgacgtggtcaaccgc
tctgacctggttggcgacctggacagacatctccggccagccgttggacccaaggtgttc
acgaactgcgccagtttcctgtacctcatatggaacgacgaccccgaggccgactacctt
gacaacacgaggatacatcctgaagattacgatctcgcgcgaaaaatcgctgccgatgcc
ttggagctcgatgaagaggacatcaaggccgaaacggatgataacggcttgggtgccgtt
gtgcgtagattggtcaaggaggatcagcaagacaaggtaaacgatctcgagctggagcag
tacgccaagcaactcgaggatcgattccagcagaagaagcgtgctaccctggagaccatt
cgcgccgaactgcaaaatccctacgaggagctccgacgaaactggaactcgttgacgact
gacgagctgtttacccagctcactggcgaaacccgcgagtcactcatggatggcatgatc
gtccctgtctcggtcaagcgtaccttccaagaccacattgaggtcaagctcgactgtggc
attgatggtggcatctctgagaccgaatatccagaagacatggtgcggcagcaaattgag
cctcgtcggatgtggtccgcgcatcaagtcatacaggccaaattgagcttcatcgatcgc
aagaagttcactgcacaactgacgctgcgtgagtcggaactgcgcaagccattccgtcgc
aacttcgatcatggtctggacgagtgggacgacatgcaagaagagcaagatcagaaggcg
atgaagaaagctatcgagagcaagactgggcggcaagtgagagtcatcaagcatccatta
ttccgacccttcaactctcaacaagccgtcgaggctttgcagtcgcaaaatcgtggagac
tgcatcattcgtccctcttccaagggaactgatcatttggctgtcacatggaaggttgcc
gagggtgtctaccagcatattgacgttctggaaatgaacaaagaaaacgagttcagcgtc
ggcaaggtgctgaaagtcggcaaggccaactattcagatctcgacgagttgattgttctg
cacgtgcaggccatggcgaagaaggttgacgagatgaccaacgatgagcgcttccagaat
ggcacgaaggagcagacagagcaatggttgaccacctacaccgaagcaaaccccaagcgt
tcgatgtatgccttctgcctgaaccgccaatacccaggctacttctacctctgcttcaaa
gccggcttcaacgcacctttggcccactgggctgtcaaggtcattccgcaaggcttcgaa
ctcagaggcaacaagtatcccgacgtcagagcgctcaagaacggtttcaagttgatcatg
tcgaacatggcgacacagaatggtggtaggcggtag
DBGET
integrated database retrieval system
