Clostridium botulinum F Langeland: CLI_0130
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Entry
CLI_0130 CDS
T00563
Symbol
udgA
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
cbf
Clostridium botulinum F Langeland
Pathway
cbf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cbf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CLI_0130 (udgA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbf03400
]
CLI_0130 (udgA)
Enzymes [BR:
cbf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CLI_0130 (udgA)
DNA repair and recombination proteins [BR:
cbf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CLI_0130 (udgA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
CIMR
Motif
Other DBs
NCBI-ProteinID:
ABS41863
UniProt:
A7G9H8
LinkDB
All DBs
Position
98655..99227
Genome browser
AA seq
190 aa
AA seq
DB search
MLKWSQLYDECINCNKCTLVKNRTNMVFGEGNISAPIMFIGEAPGADEDRTGRPFVGKAG
QLLTKALLALDFKRDEHYYICNVCKCRPENNRTPKEEEAMTCLPYLRNQVALVKPKIMIC
LGATALKYIMGEQFRITRDRGKWIERKGYYIMATFHPAALFRDESKKKLLWQDLKSIREK
YDELIKNNII
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
gtgctaaagtggtctcaattatatgatgaatgtattaattgtaataaatgtactttagtt
aaaaatagaactaatatggtatttggagaaggcaatataagtgcacctattatgtttata
ggggaagctccaggagcagatgaggataggacaggaagaccttttgtggggaaagccgga
cagttacttactaaagcattattagcattagattttaaaagagatgaacattattatata
tgtaatgtgtgcaaatgtaggccagaaaataatagaactcctaaagaagaagaagctatg
acttgcttaccttatttaagaaatcaagtggcattggtgaagcctaaaattatgatttgc
ttaggagctactgccttaaaatatattatgggagaacaatttagaataacaagagataga
ggtaaatggatagaaagaaaaggatattatattatggcaacttttcatccggcggcttta
tttagagatgagtctaagaaaaagttattgtggcaagacttaaaatctattagggaaaaa
tatgatgagttaattaaaaataatataatttag
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