Clostridium botulinum F Langeland: CLI_0329
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Entry
CLI_0329 CDS
T00563
Name
(GenBank) exonuclease, DNA polymerase III, epsilon subunit family
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cbf
Clostridium botulinum F Langeland
Pathway
cbf03030
DNA replication
cbf03430
Mismatch repair
cbf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CLI_0329
03430 Mismatch repair
CLI_0329
03440 Homologous recombination
CLI_0329
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbf03032
]
CLI_0329
03400 DNA repair and recombination proteins [BR:
cbf03400
]
CLI_0329
Enzymes [BR:
cbf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CLI_0329
DNA replication proteins [BR:
cbf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CLI_0329
DNA repair and recombination proteins [BR:
cbf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CLI_0329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
BRCT
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ABS39558
UniProt:
A7GA16
LinkDB
All DBs
Position
309287..310216
Genome browser
AA seq
309 aa
AA seq
DB search
MNFVAIDFETANEKRNSPCSIGIVVVKDGEIVEKVHYLIKPKEMRFMPINIGIHGIRPHM
VQDELEFDKIWGKIKGYFNNNLVIAHNASFDMSVLRSTLKLYNIKMPSFEYICTMKLSKN
FYSNIDNARLNTVNNFLGYKFKHHDALADAMACSNILINISKELNSKDINEISKLIGVTL
GYVNENGYKPSSTKGRILKRSNRQAPKENKKIIESFNFTSFKEEVVVFTGGLASMTRNEA
MILVGKLNGTVGSSVTKKTTYLVTNTKDIEDLNREEMSNKLKKAIDLKKKGQNIKFLNEE
AFLQKCKEK
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgtagctatagattttgaaactgctaatgaaaaaagaaatagtccatgctct
ataggtatcgtggttgtgaaagatggggagattgtagaaaaagtacattatttaataaag
cctaaggaaatgagatttatgccaataaatattggaattcatggaataaggccgcatatg
gtccaggatgaattagaatttgataaaatatggggaaaaattaagggctattttaataat
aatttagtaatagctcataatgcttcctttgatatgtctgtattaaggagtacattaaaa
ctttataatataaaaatgccaagttttgagtatatatgtacaatgaagctttctaaaaat
ttttatagtaacattgataatgcaagattaaatacagtaaataattttttggggtacaag
tttaaacatcatgatgctctggcagatgcaatggcatgtagtaatattttaattaatata
tcaaaggaattaaattcaaaggatattaatgaaatatcaaaattaattggagtgacttta
ggatatgtaaatgaaaatggatataaaccatcttccactaaaggaaggatcttaaaaaga
tctaatagacaagctccaaaggaaaataaaaagataatagaaagctttaatttcacttca
tttaaagaagaggttgttgtatttacaggtggattagcttctatgacaagaaatgaagca
atgatattagttggaaagcttaatggaactgttggaagttccgtaactaagaaaacaaca
tacttagttacaaatacaaaggatatagaggatttaaatagagaagaaatgagcaataag
cttaagaaagccatagatttaaagaaaaaaggtcaaaatataaagtttttaaatgaggaa
gcattcctacaaaaatgtaaagaaaaataa
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