Clostridium botulinum F Langeland: CLI_0538
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Entry
CLI_0538 CDS
T00563
Symbol
ddlB
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
cbf
Clostridium botulinum F Langeland
Pathway
cbf00470
D-Amino acid metabolism
cbf00550
Peptidoglycan biosynthesis
cbf01100
Metabolic pathways
cbf01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
cbf00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CLI_0538 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CLI_0538 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
CLI_0538 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cbf01011
]
CLI_0538 (ddlB)
Enzymes [BR:
cbf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
CLI_0538 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
cbf01011
]
Precursor biosynthesis
Amino acid ligase
CLI_0538 (ddlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
GARS_A
ATP-grasp
RimK
CPSase_L_D2
ATPgrasp_ST
PB1
ATP-grasp_4
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
ABS42604
UniProt:
A7GAL4
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All DBs
Position
554190..555092
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AA seq
300 aa
AA seq
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MKIGIIMGGISTEREVSLNSGREVIKYLELLEHEIIPIIIDKKEDVMEKAKGIDFAFLAL
HGEFGEDGTVQSVLQTLDIPYSGCGPLTSAICMDKDMTKKILKYANINTADWVNVSSVEN
IDYEAIEKIGYPVFVKPNSGGSSVATNLVKDKEGIKEAVELALKYDKEVMIENYTKGEEI
TCCMLNGKMLPVLAIRPHAEFFDYTAKYADGGSDEVVIELEENLHKKVEEMALACWKELK
CEVYVRVDMIVKDGIPYVLELNTLPGMTKNSLFPKSANAVGISFAELLNSIVKYSLEVER
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattggaattataatgggtggaatatctacagaaagagaggtttccttgaattct
ggtagagaagttataaaatatttagagcttttagagcatgaaattattcccattattata
gataaaaaagaagatgtcatggaaaaagctaagggtatagattttgctttcctagcattg
catggtgagtttggtgaagatggaacagttcaatcagttcttcaaactttagatatacct
tattcgggatgtggtcctttaacaagcgctatatgcatggataaggatatgactaagaaa
attttaaaatatgctaatataaatacggcagattgggtaaatgtatctagtgtagagaat
atagattacgaagctatagaaaaaatagggtacccagtgttcgtaaaacctaatagcggt
ggttctagtgtagctacgaacttagtaaaagataaagaaggtataaaagaagcagtagaa
cttgcattaaaatatgataaagaagttatgatagaaaattatacaaaaggtgaagagata
acttgctgtatgctaaatggcaaaatgttaccagtattagctataagaccacacgcagaa
ttctttgactacacagcaaaatatgcagatggtggatcagatgaagtggttatagaatta
gaagaaaatcttcataaaaaggtagaagaaatggccttagcttgttggaaagaattgaaa
tgtgaagtatatgtaagggtagatatgatagttaaggatggaattccttatgtattagaa
ttaaatacattacctggtatgacaaaaaatagcttgttccctaagagtgctaatgcagta
ggaatatcctttgcagaattattaaattcaatagttaaatattcattagaagtagaaaga
taa
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