Clostridium botulinum F Langeland: CLI_1517
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Entry
CLI_1517 CDS
T00563
Name
(GenBank) pseudouridine synthase, RluA family
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
cbf
Clostridium botulinum F Langeland
Brite
KEGG Orthology (KO) [BR:
cbf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cbf03009
]
CLI_1517
Enzymes [BR:
cbf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
CLI_1517
Ribosome biogenesis [BR:
cbf03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CLI_1517
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
BLYB
DUF7743
Motif
Other DBs
NCBI-ProteinID:
ABS39619
UniProt:
A7GDC2
LinkDB
All DBs
Position
1596229..1597182
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AA seq
317 aa
AA seq
DB search
MKIVIGANEAGQRLDKFCRKWLKDVPLSAIYKAIRKGEIKVNGRKSKEKNFLEEGDIVES
FNVKSKGEKKKFVRIDNNLKITYEDENMVLVEKWPGVLVHSDKKEGEPTLTDYVLSYLYD
KGDYTPELEVTFTPASCNRLDRNTSGIVIFGKNYEALKTLNEMIRDRKIEKYYSSLVKGR
IKDGVYEAYISKNEDTNMSKIYNEPKPNTKKIAMNVKTIQTCGSFSFIEIELLTGRSHQL
RAHLNHLGNPIIGDSKYGDKKLNSFFHNKYGLSYQYLYSYKLIFRNTMGNLEYMKNKTIA
ETLPPIFKKIKKDVFKF
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagtaataggagcaaatgaagctggccaaaggttagataagttttgtagaaaa
tggttaaaggatgtacctctaagtgctatatataaagctataagaaaaggtgaaataaag
gtcaatggtagaaaatctaaggaaaagaattttctagaagaaggagatatagtagaatcc
ttcaatgtaaaatctaagggagaaaaaaagaagtttgttagaatagataataatcttaag
attacctatgaagatgaaaatatggtattagtagaaaagtggccaggagttttagttcat
tcggataaaaaagaaggagagcctaccttaacagattatgtgctatcttatctttatgac
aaaggggattacactccagaactagaagttacttttacaccagcatcttgtaatagatta
gatagaaatacctctggtatagttatatttgggaagaattatgaagcattaaaaacttta
aatgaaatgataagagatagaaaaatagaaaaatattattcttctttagtaaaaggaaga
attaaagatggtgtttatgaagcttatatatctaaaaatgaggacacgaatatgtctaaa
atatataatgaaccaaagcctaatactaaaaaaatagctatgaatgttaagactattcag
acctgcggttccttttcatttatagaaatagagcttttaacaggaagaagccatcaactt
agagcccatttaaatcatttaggaaatcctataataggggattctaaatatggggataaa
aaattaaatagctttttccacaataaatatggattaagttatcaatatttatattcctat
aaacttatatttagaaacactatgggaaatttggaatatatgaaaaacaaaaccatagcg
gaaactttaccaccgatttttaagaaaataaagaaagatgtgtttaagttttaa
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