Clostridium botulinum F Langeland: CLI_1775
Help
Entry
CLI_1775 CDS
T00563
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cbf
Clostridium botulinum F Langeland
Pathway
cbf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLI_1775 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbf03019
]
CLI_1775 (deaD)
03009 Ribosome biogenesis [BR:
cbf03009
]
CLI_1775 (deaD)
Enzymes [BR:
cbf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CLI_1775 (deaD)
Messenger RNA biogenesis [BR:
cbf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CLI_1775 (deaD)
Ribosome biogenesis [BR:
cbf03009
]
Prokaryotic type
rRNA helicases
CLI_1775 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_19
UvrD-helicase
SWI2_SNF2
AAA_30
Helicase_C_2
AmiA-like
CD4-extracel
Motif
Other DBs
NCBI-ProteinID:
ABS42190
UniProt:
A7GE25
LinkDB
All DBs
Position
1896225..1897670
Genome browser
AA seq
481 aa
AA seq
DB search
MNKLTFENYKLSDEILKSLGKLGYKNPSEVQKQVIPLILKDKDIIVKSETGSGKTAAFSI
PVCEKLELEEKDPQVLVLTPTRELALQIKEEISSIALYKRLRCTAIFGKQPMSLQKRELK
QRVHLVVGTPGRTLDHIERENLDLKKIKYFVLDEADEMLNMGFIDQVEAVIKRLPKNRVT
MLFSATIPEKIENLCKKYMNNPQNININPENITTDTINQCYYEVEDKDKFSLLQKIIYKE
VVDNSIIFCNTREKVDEVLKNMKKKGLNAVGLHGGMEQKDRLETMKKFKEGEFQFLVCTD
VAARGIHIENISHVINYEMPYEKESYVHRIGRTGRAGKEGVAITFIEPNKVRFLRDIEDY
IEKEIPKRKEPSLEEVDKGKKIFEENIKNRIKTKVPKNNKKQKDITKIYISAGRKKKIRP
GDIVGAITSIEGINVDNIGIIDIQDNHSYVDILEGKGDIVLKASEDMKIKGKKVRIQRAV
K
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaataaattaacttttgaaaattataaattaagtgatgaaatattaaaatccctggga
aaactaggatataaaaatccctctgaggtgcaaaaacaagttataccactaatattaaag
gataaggatattatagtaaagtctgaaaccggtagcggtaagactgcggccttttccata
cctgtctgtgaaaaattagagctagaagaaaaagatcctcaagtattagtgcttacacct
actagggaattagctcttcaaatcaaagaggagatatcaagcatagctttatataaaaga
ttaagatgtacagcgatttttggtaagcagcctatgagccttcaaaagagggaattaaag
caaagagtacatttagttgtaggtactccaggtagaactttagatcatatagaaagggaa
aatttagatttaaaaaagataaagtattttgttttagatgaagcagatgaaatgcttaat
atgggatttatagatcaagtagaagctgttataaaaagattgcctaaaaatagagtaact
atgttgttttcagctactataccggaaaaaatagagaatttatgcaaaaaatatatgaat
aatccccaaaatataaacataaatccagaaaacataactacagacaccataaatcaatgc
tattatgaagttgaggataaagataagttttctcttttacaaaaaataatatataaagaa
gtagtagataattctattatattttgtaatacaagagaaaaggtagatgaagtattaaaa
aatatgaagaaaaaagggcttaacgctgttggtctgcatggtggtatggaacaaaaagat
agattagagactatgaaaaagttcaaagaaggtgaatttcagttcttagtatgtacagat
gtagcagctagaggtattcatatagaaaatataagccatgttataaattatgagatgccc
tatgaaaaagaaagttatgttcatagaatagggagaacaggaagagcaggaaaagaagga
gtagctataacctttatagaacctaataaagttagatttttaagagatatagaagattat
atagagaaggaaatacctaaaaggaaggagccttctttagaagaagtagataagggtaaa
aaaatatttgaagaaaatattaaaaataggattaaaacaaaagtgccaaaaaataataaa
aagcaaaaggatattactaaaatatatataagtgcaggaagaaagaaaaaaattaggcca
ggagatattgtaggtgctattactagtatagaaggcattaatgtagataatataggtata
atagatatacaggataatcactcttatgtagatatactggaaggaaaaggagatatagta
cttaaagctagtgaagatatgaaaataaagggaaaaaaagtaagaatacaaagggcagta
aaataa
DBGET
integrated database retrieval system
