Clostridium botulinum F Langeland: CLI_1861
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Entry
CLI_1861 CDS
T00563
Symbol
dacF
Name
(GenBank) serine-type D-Ala-D-Ala carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
cbf
Clostridium botulinum F Langeland
Pathway
cbf00550
Peptidoglycan biosynthesis
cbf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cbf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CLI_1861 (dacF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cbf01002
]
CLI_1861 (dacF)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cbf01011
]
CLI_1861 (dacF)
Enzymes [BR:
cbf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CLI_1861 (dacF)
Peptidases and inhibitors [BR:
cbf01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
CLI_1861 (dacF)
Peptidoglycan biosynthesis and degradation proteins [BR:
cbf01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
CLI_1861 (dacF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
PBP5_C
Beta-lactamase
Peptidase_S13
Tubby_C_like
PSCyt1
Bee_toxin
Motif
Other DBs
NCBI-ProteinID:
ABS41552
UniProt:
A7GEA9
LinkDB
All DBs
Position
complement(1998924..2000147)
Genome browser
AA seq
407 aa
AA seq
DB search
MKRKIYYFFSVIITITFIFGVFVTPVSAYDQQNQLKREEKAEDKDSNKEGGLDVDAKSAL
LIEPTTGKVIYEKNPHEKFAPASVTKIMTMLLSMEAVDSGKIKLTDKVTISENAKKMGGS
TMLLDVGEERTVEDLLKGIAIASGNDAAVAMGEYLAGSEEAFVKMMNDRAQKLNMKDTSF
KNCTGLSVEGHKTSAYDISIMSRELLKHKQILKYTGTYMETISEGRKSPIGLVNHNKLVR
FFKGCDGLKTGFTDEAKYCISATAKKDGVRMLAVIMGAPTYKIRNKDASKLMNYGFSKFE
CKTLVKKGDVISKVPLNSKGDKYFMAKSCEELDAIIEKGKKTKITNKCIIDENKKEYKIN
EEVGICEFYSDGNLIGKVKITSDRNIRKSGIFNHFKGGFERLIDKGI
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaaaaatttattactttttcagtgtaataattaccataacttttattttcggt
gtatttgtaacaccagtaagcgcatatgaccaacaaaatcagttaaaaagagaagaaaaa
gcggaagataaagattctaataaagaaggtggcttagatgtagatgctaaatcagcactt
cttattgaacctacaacaggaaaggttatttatgaaaaaaatcctcatgaaaaatttgct
ccagcatcagttacaaaaattatgacaatgcttctatcaatggaagcagtagatagtggg
aaaataaagttaactgataaagttactataagtgaaaacgctaaaaaaatgggcggaagc
accatgcttttagatgtaggagaagaaagaactgttgaagaccttttaaaaggtatagca
atagcttctgggaatgatgctgcagtagctatgggagaatacttagcaggaagcgaagaa
gctttcgtaaaaatgatgaatgatagagcacaaaaattaaatatgaaagatacgtctttt
aagaattgtactgggcttagtgtagaaggtcacaaaacttcagcctatgatatatctata
atgtcaagagaactattaaaacataaacaaatattaaaatatacaggaacatatatggaa
accatatcagaaggaaggaaaagccctataggattagtaaatcataataaacttgttaga
ttctttaaaggctgtgatgggctaaaaacaggatttacagatgaagctaaatattgtata
tcagccacagcgaaaaaagatggagtaagaatgttagcggtaataatgggagctccaact
tataaaataagaaataaagatgctagtaaacttatgaattacggattttcaaaatttgaa
tgcaaaactttagttaaaaaaggagatgtaatatcaaaggtacctttaaattctaaagga
gataaatactttatggcaaaatcctgtgaagaattagatgctataatagaaaaaggtaag
aaaacaaaaataactaataaatgtattatagatgaaaataagaaagagtataaaataaac
gaagaagttggtatatgtgagttttattcagatggtaatttaataggtaaagttaaaata
acttctgatagaaatataagaaaatcaggaatttttaatcactttaaaggtggatttgaa
aggttaatagataagggtatataa
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