Clostridium botulinum F Langeland: CLI_1976
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Entry
CLI_1976 CDS
T00563
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
cbf
Clostridium botulinum F Langeland
Pathway
cbf00300
Lysine biosynthesis
cbf00470
D-Amino acid metabolism
cbf01100
Metabolic pathways
cbf01110
Biosynthesis of secondary metabolites
cbf01120
Microbial metabolism in diverse environments
cbf01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
cbf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CLI_1976 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CLI_1976 (dapF)
Enzymes [BR:
cbf01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
CLI_1976 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
Pro_racemase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
ABS39469
UniProt:
A7GEM4
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All DBs
Position
complement(2089457..2090278)
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AA seq
273 aa
AA seq
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MKFTKMTGTGNDFIVLDDRKGSLIGKEKELAQKLCNRHFSIGADGILFVRESDTDAQIQM
VIINADGSYASMCGNGIRCFAKYVWEKSIVKENPMIIETGDGLKEAFLDIEEDKVKYITI
NMGEPIFEGEKISNEKEKIMNKSIRENNKEYSITAFHMGVPHTIIFGNLDEYDIGEGKNI
ERLPLFKEGTNVNFCEVVDKNKIKVKTWERGAGPTLACGTGSCASAIASNLLGYTGKSTE
VILPGGKLFIEIKENSVFMKGPADICFRGEIDV
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttactaaaatgactggaactggtaatgattttatagttttagatgacagaaag
ggaagtttgataggaaaagagaaagaattagcgcaaaaattatgtaatagacattttagt
ataggggcagatggtattttatttgtaagggaaagtgataccgatgctcagatacaaatg
gtaataataaatgcagatggttcttatgcttctatgtgtggaaatggtataagatgtttt
gcaaagtatgtatgggaaaaatctatagtaaaagaaaatcctatgataatagaaacagga
gatggcttaaaggaggcttttctagatattgaagaggataaagtaaaatatattactatt
aacatgggtgaaccaatatttgaaggagaaaaaatatccaatgaaaaggaaaaaataatg
aataaaagtattagggaaaataacaaagaatattctataacagcctttcatatgggagtt
ccccatactataatatttggcaatttagatgaatatgatataggagaaggtaaaaatata
gaaaggctacctttatttaaggagggaactaatgtaaacttctgcgaggtagtggataaa
aataaaataaaggtaaaaacctgggaaaggggtgcaggaccaactttagcttgtggtact
ggaagttgtgcatcagctatagcatctaatttattgggctatacaggaaagtctacagag
gtaatattgccagggggcaaacttttcatagaaattaaagaaaatagtgtttttatgaag
ggccctgcggatatttgttttagaggagaaatagatgtataa
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