Clostridium botulinum F Langeland: CLI_2471
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Entry
CLI_2471 CDS
T00563
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cbf
Clostridium botulinum F Langeland
Brite
KEGG Orthology (KO) [BR:
cbf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cbf03016
]
CLI_2471 (truB)
Enzymes [BR:
cbf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CLI_2471 (truB)
Transfer RNA biogenesis [BR:
cbf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CLI_2471 (truB)
Prokaryotic type
CLI_2471 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ABS41761
UniProt:
A7GG03
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All DBs
Position
complement(2595014..2595883)
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AA seq
289 aa
AA seq
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MDGVINVLKPKGITSFDVVRDIRKIAKIKKVGHTGTLDPLASGVLPICIGKATKIVDYIM
EGTKTYRVEMKLGTTTDTYDREGTVLEEKEINLTPIEVEKTIKKYIGDIDQVPPMYSALK
INGQKLYDLARKGIEIEREARKIHIYDICILSIDLPYVIFDVKCSKGTYIRSLCFDIGKD
LDSGAVMWNLQRLEASPFNIKEAIKLEDLNEENIKQYITPIDEALKDYEKLSLDKKFEKL
VLNGVVLKDRRVLDNIEENKLYRTYIEDDSFIGLGMKNAYGFKIHKLLT
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggatggagtaataaatgttttaaaaccaaaggggataacatcctttgatgtagttaga
gatataagaaaaatagcgaaaataaaaaaagtcggtcatacaggtacattagatccctta
gcttctggtgttctccctatatgtataggtaaggctaccaaaatagttgattatataatg
gaaggaactaaaacctacagagtagaaatgaaacttggaactaccacagacacttatgat
agagaaggcactgtattagaggaaaaagaaataaatctaactcctatagaggtagaaaag
actattaaaaaatatataggagacatagaccaagtacctcctatgtattctgccttaaaa
attaatggacaaaaactttatgacttggccagaaaaggtatagagatagaaagagaagca
agaaaaatacatatatatgatatatgtattttaagtatagatttaccctatgttatattt
gatgttaaatgttcaaagggaacttatataagaagtttgtgttttgatataggaaaggat
ttagattctggagcagtaatgtggaatctacaaagattagaagcaagcccctttaatata
aaagaagctataaaattagaagatttaaatgaggaaaatataaaacagtatataacacct
atagatgaagctttaaaggattatgaaaaattatctttagataaaaaatttgaaaaactt
gtactgaatggtgtagtattaaaagatagaagagttttagataatatagaagaaaacaaa
ctatatagaacttatatagaagatgatagttttataggattaggaatgaaaaatgcatat
ggatttaaaattcataaattattaacttag
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