Clostridium botulinum F Langeland: CLI_3068
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Entry
CLI_3068 CDS
T00563
Symbol
polA-2
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cbf
Clostridium botulinum F Langeland
Pathway
cbf03030
DNA replication
cbf03410
Base excision repair
cbf03420
Nucleotide excision repair
cbf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CLI_3068 (polA-2)
03410 Base excision repair
CLI_3068 (polA-2)
03420 Nucleotide excision repair
CLI_3068 (polA-2)
03440 Homologous recombination
CLI_3068 (polA-2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbf03032
]
CLI_3068 (polA-2)
03400 DNA repair and recombination proteins [BR:
cbf03400
]
CLI_3068 (polA-2)
Enzymes [BR:
cbf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CLI_3068 (polA-2)
DNA replication proteins [BR:
cbf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CLI_3068 (polA-2)
DNA repair and recombination proteins [BR:
cbf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CLI_3068 (polA-2)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CLI_3068 (polA-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_2
Imm50
HHH_5
InlK_D3
Motif
Other DBs
NCBI-ProteinID:
ABS40371
UniProt:
A7GHM9
LinkDB
All DBs
Position
complement(3244276..3246903)
Genome browser
AA seq
875 aa
AA seq
DB search
MNKERLLILDSNSLLNRAFYALPDLMTGEGIHTNAIYGFVNMLLKMKEEINPDYIVAAFD
RKAPTFRHEEYKDYKAGRKKMPEELAQQFPIIKELLSALAINIFEIDGFEADDLIGTLSV
FAEEKGIEVYIVTGDKDALQLATDSVKVVITKKGITEKEIYDKNRMVEEFGVTPKEFIDV
KGLMGDTSDNIPGVPGIGEKTAFKLIKEYKSIETVFENIENIKGKKLKENLHEYREQAIF
SKKLATIICNVPIDMSLEDIKSKEEYDINKVREMFERLEFKSLMNKVGKGNEGETVEEEV
SYKNIVSLEEFRDLKNNIIKYKENDLYLYFELEDIVLFSKSRVKTLYANFKDEVYRIDFE
MLLNNTKEQFIEVCREMFESKEIKKITYDAKNPRTILRKLGIEFNGIKFDINLAAYLINP
VRKEYEISSLASEYLFKNINREDEFLKIKEVNIMPNLYKVLEEKIKEQDMEELLYKVEQP
LTETLSAMETEGFKVDKDILLQLEKKFKGEIESTQLEIYSMSEEEFNINSPKQLGKILFE
KLDLPVIKKTKTGYSTNAEVLDKLRDKHPIIDKITYYRQLTKIYSTYIEGLKAAIDEDGK
IHSNFNQTVTATGRLSSTEPNLQNIPIKYEMGREIRKVFIPNTGDSVILSADYSQIELRV
LAHISDDKNMISAFNEHDDIHTKTASEVFKVPIEEVTPLMRSNAKAVNFGIVYGIGDFSL
SQDLNITRKEAKQYIDAYLERYPNVKLYLENIVEEAVEKGYVSTILNRRRYIKEVKSSNK
IVKAAGERLAMNSPIQGSAADIIKLAMVNVHRKLKEDNFKSSIILQVHDELILNVHKDEL
EKIKALVKKEMEQVLELKVGLDVDINIGNNWYEAK
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagaaagattattaatattagatagtaatagtttattaaatagagctttttat
gcattacctgatcttatgactggagagggaattcatactaatgctatatatggttttgtt
aatatgcttttaaaaatgaaagaagagataaacccagattatatagttgcagcttttgat
agaaaggcacctacctttagacatgaagaatataaggactataaagcaggtagaaaaaag
atgccagaggaacttgcacagcagtttcctataataaaagagcttttgtccgcattagcc
ataaatatattcgaaattgatggatttgaagcagatgatctaataggaactttatctgta
tttgcagaggaaaaaggaatagaagtttacatagttacaggagataaagatgccctacaa
ttggctacggatagcgtaaaagtagttataactaaaaagggtattacagaaaaagaaatt
tatgataaaaatagaatggtagaggagtttggagttactcctaaagaatttatagatgta
aaaggtcttatgggagacacatctgacaatatacctggagtacctggaataggtgaaaaa
actgcctttaagcttataaaagaatataaaagtatagaaacagtatttgaaaacatagag
aatataaaaggaaaaaaattaaaggaaaatttacatgaatatagagagcaggctatattt
agcaaaaaattagctactattatatgtaatgttcctatagatatgagtttagaagatata
aaatcaaaggaagaatatgatataaacaaagttagagaaatgtttgaaaggttagaattt
aaatctttaatgaataaagtaggtaaaggtaatgagggagaaactgtagaagaggaagtc
tcttataaaaatatagtttctctagaagaatttagagatctaaaaaataatataataaaa
tataaagaaaatgatttatatctgtattttgaattagaagatatagttttattttctaaa
tctagagtaaaaacattatatgctaattttaaagatgaggtttatagaatagactttgaa
atgttgctaaataatactaaagaacaatttatagaagtatgcagggaaatgtttgagagt
aaagaaattaaaaaaattacctatgatgcaaaaaatccaaggactatactaagaaaatta
ggaatagagtttaatggtataaaatttgatataaatttagctgcatatctaataaatcca
gtgaggaaagaatatgagatatctagtttagcttcggaatatttgtttaaaaatataaat
agagaagatgaatttttaaaaataaaagaagttaatataatgcctaatttatataaagtg
ctggaagaaaaaataaaagagcaagatatggaagaactgttatataaggtagaacaacct
cttacagaaacattatcagctatggagacagaaggttttaaagttgataaagatatactt
ttacagctagagaaaaaatttaaaggggaaatagaaagtactcagctagaaatatattca
atgtctgaagaagaatttaatataaattctcctaaacagttagggaaaatactctttgaa
aaattagatttacccgttataaagaaaacaaagacaggatattctactaatgcagaggta
ctggataaattaagagataaacatccaataatagataaaataacttattatagacaatta
acaaaaatatactctacttatatagaagggctaaaagctgctatagatgaggatgggaaa
atacattcaaattttaatcaaactgttacagctacagggagattatctagtacagagcct
aatcttcaaaatatacctataaaatatgaaatgggaagagaaataagaaaggtatttatc
cctaatacaggggattctgtaatactttcagcggattattcacaaatagaattaagagta
ttagcacatatatctgatgataaaaatatgataagtgcctttaatgaacatgatgatatt
catactaaaactgcatcagaagtgtttaaagttccaatagaagaagtaacacctcttatg
agaagtaacgctaaagcagttaattttggtatagtttatggtataggagactttagctta
tctcaagatttaaatataactagaaaagaagcaaagcagtatatagatgcttatttggag
agatatcctaatgtaaaactttatttagaaaatatagtagaagaagccgttgaaaaaggg
tatgtaagtactatattaaatagaagaagatatataaaagaggttaagtcttcaaataaa
atagttaaagctgcaggagaaaggctagctatgaatagtccaatacaaggaagtgcagca
gatataataaaattagctatggtaaatgttcatagaaaattaaaagaagataattttaaa
agtagtataatattacaagtacatgatgaattaatattaaatgtccataaagatgaacta
gaaaaaatcaaagctttagtaaaaaaagaaatggaacaggttttagaattaaaagttggg
ttagacgtggatataaacataggtaataattggtatgaagcaaagtag
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