Clostridium botulinum F Langeland: CLI_3444
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Entry
CLI_3444 CDS
T00563
Name
(GenBank) RNA pseudouridine synthase family protein
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
cbf
Clostridium botulinum F Langeland
Brite
KEGG Orthology (KO) [BR:
cbf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cbf03009
]
CLI_3444
Enzymes [BR:
cbf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
CLI_3444
Ribosome biogenesis [BR:
cbf03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
CLI_3444
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ABS41148
UniProt:
A7GIK9
LinkDB
All DBs
Position
complement(3573044..3573760)
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AA seq
238 aa
AA seq
DB search
MERLDKILANLGYGTRKEVKALIKKGQVDVDGEVVKDNGMQIDPEKNKIFVFGKELVYKK
YIYLMMNKPQGVVSATFDNYDETVIDLLEDEDRIFEPFPVGRLDKNTVGLLLLTNDGELN
HRLISPKWHVDKIYYAKINKKVTDEDIKKFKKGIILDDGYECFPAKLEIIKSFNEESEVR
VTIHEGKFHQVKRMFESVDKKVIYLKREEFGPLKLDESLEEGEYRELTDEEISILKNL
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggaacgtttagataaaatactagccaacttaggatatggtacaagaaaagaagttaag
gctttgattaaaaaagggcaagttgatgttgatggtgaagttgttaaagataatggtatg
caaatagatccagaaaaaaataaaatatttgtatttggaaaagaattagtttataaaaaa
tatatttatttaatgatgaataaaccccaaggggtagtttctgcaacttttgataactat
gatgaaactgttatagatttgttagaagatgaagacagaatctttgaaccttttcctgtg
ggtaggttagataaaaatacggtaggcttacttttgcttactaacgatggtgagttaaat
cacagacttatatctcctaaatggcatgtggataaaatatattatgccaaaattaataaa
aaggttactgatgaagatataaagaaatttaagaaaggtataatattagatgatggttat
gaatgttttcctgcaaagcttgaaataataaaatcatttaatgaggaatcagaagtaaga
gttactatacatgaaggtaaatttcatcaagtcaaaagaatgtttgaaagtgttgataaa
aaggttatttacttaaaaagagaagaatttggaccattaaaattagatgagagcttagaa
gagggtgaatatagggaattaacagatgaagaaatatctatattaaaaaatctataa
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