Clostridium botulinum F Langeland: CLI_3629
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Entry
CLI_3629 CDS
T00563
Symbol
truA-2
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cbf
Clostridium botulinum F Langeland
Brite
KEGG Orthology (KO) [BR:
cbf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cbf03016
]
CLI_3629 (truA-2)
Enzymes [BR:
cbf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CLI_3629 (truA-2)
Transfer RNA biogenesis [BR:
cbf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CLI_3629 (truA-2)
Prokaryotic type
CLI_3629 (truA-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF1473
DUF2344
Motif
Other DBs
NCBI-ProteinID:
ABS39823
UniProt:
A7GJ40
LinkDB
All DBs
Position
complement(3791475..3792215)
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AA seq
246 aa
AA seq
DB search
MKNIKLKLEYDGANYCGWQKQKNEKFITLQGTLEKAISNITKEKIEVIGASRTDSGVHAK
GYICNFFTNTKIPPENLQKVINNNLPPDIVVLSSEEASSEFHSRFCSKGKTYEYTVLNSS
QPIAIGRNYIFQFKNKLNIDNMKMASRYFIGTHDFSAFKTKGSSIKTSVRTISKFEINKK
GDFIKFIITGDGFLYNMVRIMVGTLIEIGLNKREPEYIKYVIKSKDRTKAGKCVPSSGLC
LKEVFY
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaatataaaattgaaacttgagtatgatggagcaaattattgtggatggcaaaaa
caaaaaaatgaaaagtttattacgttacaaggtactttagaaaaagctataagtaatata
actaaagaaaaaatagaagttataggagccagtagaacagattcgggggtccatgctaaa
ggatatatatgcaatttttttacaaacactaaaataccacctgaaaatttacaaaaagta
attaataataatttaccaccagatatagtagttttaagttcagaggaagctagtagtgag
ttccattctagattttgtagtaagggcaagacttatgaatatacagttctaaatagctct
cagcctatagccataggcagaaattatatttttcagtttaaaaataaactcaatatagat
aatatgaagatggcatcaagatattttataggaacacatgatttctctgcttttaaaaca
aagggaagtagtataaaaacttcagtaagaactataagtaaatttgaaataaataaaaag
ggtgattttataaagtttataattacaggagatggttttctttataacatggtaagaata
atggtaggtacattgatagaaattggactaaataaaagagaaccagaatatataaagtat
gttataaaatcaaaggatagaacaaaagcagggaaatgtgtgccttcatctggactgtgt
ttaaaggaagtattttattaa
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