Clostridium botulinum F Langeland: CLI_3754
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Entry
CLI_3754 CDS
T00563
Symbol
hup
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
cbf
Clostridium botulinum F Langeland
Brite
KEGG Orthology (KO) [BR:
cbf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbf03032
]
CLI_3754 (hup)
03036 Chromosome and associated proteins [BR:
cbf03036
]
CLI_3754 (hup)
03400 DNA repair and recombination proteins [BR:
cbf03400
]
CLI_3754 (hup)
DNA replication proteins [BR:
cbf03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CLI_3754 (hup)
Chromosome and associated proteins [BR:
cbf03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CLI_3754 (hup)
DNA repair and recombination proteins [BR:
cbf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CLI_3754 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
Peptidase_C80
HU-DNA_bdg
DUF2267
Lmo2446-like_N
Motif
Other DBs
NCBI-ProteinID:
ABS41196
UniProt:
A7GJC8
LinkDB
All DBs
Position
complement(3879792..3880070)
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AA seq
92 aa
AA seq
DB search
MNKSELITSMAEKSKLTKKDAETALKAFIESVEEALEGGEKVQLVGFGTFETRERAERVG
RNPRTKEEITIPASIAPVFKAGKELKEKVNKK
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaatcagaattaattacaagcatggcagaaaaatcaaaattaactaaaaaggat
gcagaaacagctttaaaggcatttatagaaagtgttgaagaagcattagaaggtggagaa
aaagttcaattagttggctttggtacttttgaaactagggaaagagctgaaagagtaggt
agaaatccaagaactaaggaagaaataactatacctgcatcaatagcacctgttttcaaa
gcaggaaaagaactaaaagaaaaagtaaacaaaaaataa
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