Coxiella burnetii CbuG_Q212: CbuG_0913
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Entry
CbuG_0913 CDS
T00787
Symbol
rnr
Name
(GenBank) ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
cbg
Coxiella burnetii CbuG_Q212
Pathway
cbg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CbuG_0913 (rnr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbg03019
]
CbuG_0913 (rnr)
03016 Transfer RNA biogenesis [BR:
cbg03016
]
CbuG_0913 (rnr)
Enzymes [BR:
cbg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
CbuG_0913 (rnr)
Messenger RNA biogenesis [BR:
cbg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CbuG_0913 (rnr)
Transfer RNA biogenesis [BR:
cbg03016
]
Prokaryotic type
tRNA degradation factors
CbuG_0913 (rnr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD2
OB_RNB
S1
OB_RNR_1st
RNase_II_C_S1
OB_HELZ2
TFIIE_beta
CSD
Motif
Other DBs
NCBI-ProteinID:
ACJ18288
LinkDB
All DBs
Position
885959..888208
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AA seq
749 aa
AA seq
DB search
MRYYSVLPLKEELVVKSYRKKDPYYEREASLYEHPVPSREFIIQYLKEINRPVSFKHLLS
AFDLKKAEEKEGLQRRLIAMERDGQVISNRRGSYALVKELELIRGRVQAHRDGFGFLIPD
DGSVDIFLPAREMRMVFTDDIVLVRITNPKERRPEGAIVEILERNTHQVVGRYFEEGGIA
FVDPNHKLITQDILIPPGQQGEAKTGQFVVAEITVQPTKRRQAMGRIIEILGDQLTPGME
VELAIRTHELPYRWPNEVLREAKKLPVELMEYDKKGRKDLRKLPFMTIDGEDARDFDDAV
YCESKSSGWKLYVAIADVSHYVSRESALDKEGQLRGNSVYFPSKVIPMLPEALSNNLCSL
VPNKDRLAIVCEIHLTAKGKVSKYQFYEAVIHSHARLTYTQVAAMLRGEKTKNEEMLPHI
KNLDQLYQNLLRQRINRGAIEFETTETRIQFDQKGKIKRIVPVVRNEAHRIIEECMLVAN
VSASHFLQEKNIPTLYRVHEGPDEQKLHDLKQFLRAFGLRLTGGDKPTPMDYAKLLLRIE
KRPDAHLLQTVMLRSLRQAIYTPEDGGHFGLSYERYCHFTSPIRRYPDLLVHRGIRHALQ
KKSPKKFHYDNPKLGELGEHCSMTERRADRATREAVDWLKCEYMMNKIGQAYAGHIVDVT
GFGVFVQLDQIYIEGLVHITALENDYYHFDPVHHLLRGKRSGRVYRLGDTIHVIVARVDL
DDRKIDFVLEEVNSPPLQKRKSRRKKARG
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgaggtattattccgttttacccttaaaagaggaactagtggttaaatcttatcgaaaa
aaagatccctattacgaaagggaagcgtctttgtatgaacatccggttcccagccgggaa
ttcattatccaataccttaaagaaatcaaccgccccgtcagctttaaacatttattaagc
gcttttgatttaaaaaaagcggaggaaaaagagggcctacagcgccggttaatcgcgatg
gagcgggacgggcaagtgattagcaatcggcgcggtagttatgcgttggttaaagagttg
gagttgatccggggtcgtgtccaagcgcaccgtgatggctttggattccttattcctgat
gacggttctgtcgatattttcctgcccgctcgggaaatgcgaatggtatttacagacgat
atcgttttagttcgtattaccaacccgaaagagcgccgaccagaaggcgcgatcgtggaa
attttggagcgaaatacgcatcaagtcgtggggcgatattttgaagaaggggggatcgcc
tttgttgacccgaatcataaattaattacccaagatattttaattcctcccggccagcaa
ggagaggcaaaaacgggacaatttgtggtggcagaaattaccgtgcaacccaccaagcgt
cgccaagcgatgggacgtattattgaaatactgggcgaccaattaacccctggaatggag
gttgagctggccattcggacgcatgagcttccctaccgctggccgaacgaagttttgcgg
gaagctaaaaaactacccgtggaattgatggaatacgacaaaaaaggacgcaaagacctt
cggaagctgcctttcatgacgattgatggcgaagacgcgagagattttgatgacgctgtt
tattgcgaatcgaaatcgagcggttggaaactctatgtcgctattgccgacgtttcgcat
tacgtttctcgagagagtgcattagataaagaagggcaattacggggaaattctgtctat
tttccctcgaaagttattccgatgctacccgaagcgttatctaacaacctttgctcgctt
gtaccgaataaagatcgtttagccattgtttgcgaaatacaccttactgccaaaggcaaa
gtcagcaaatatcaattttatgaagcggttattcattcccatgcgcgtttgacttacacg
caagtcgccgccatgctccgcggagaaaaaactaaaaatgaagaaatgttaccgcatatt
aaaaatttagatcaactttatcaaaatttattgcgacagcgtattaatcgcggcgcaata
gaatttgaaacgactgagactcgaattcaatttgatcaaaaaggaaaaattaaacgcatc
gttcccgttgtacgcaatgaagcgcatcgcatcattgaagaatgtatgttagtagctaac
gtttcggcctcgcattttttacaagaaaaaaatattccaacgctttatcgtgtacacgaa
ggtcctgatgagcaaaaattacatgaccttaaacaatttcttcgcgcgtttggattacgc
ttgacgggcggtgataagccaacgccgatggattatgcaaaattattattgcgcattgag
aaacgccccgatgctcatttattacaaacggtgatgctccgctcgctgcgacaagccatt
tatacccctgaagatggagggcattttggcctttcctacgagcgttactgtcattttact
tcgcccattcggcgctacccggatctgctggttcaccgtgggattcgacacgcgttacaa
aaaaaatcccccaagaaatttcattacgacaatccaaaattaggcgaattgggagagcat
tgctcgatgaccgaacgtcgcgccgaccgtgcgacacgcgaagcggttgactggttaaaa
tgcgaatatatgatgaataaaataggtcaagcttatgcaggacatattgttgatgtcacg
ggctttggcgtttttgtgcaattggatcaaatttatatcgaaggattggtgcacattacg
gcgctagaaaacgattactaccattttgaccctgttcatcatcttctgcgcggcaaacgc
agcggccgggtttaccgactgggcgatactatccatgttattgtcgccagggttgattta
gacgatcgtaaaatcgattttgtgttagaagaggtaaattctcccccacttcaaaagcgc
aaatcccgcagaaaaaaagctcgaggctag
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