Clostridium botulinum A Hall: CLC_0182
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Entry
CLC_0182 CDS
T00575
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cbh
Clostridium botulinum A Hall
Pathway
cbh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLC_0182 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbh03021
]
CLC_0182 (rho)
03019 Messenger RNA biogenesis [BR:
cbh03019
]
CLC_0182 (rho)
Transcription machinery [BR:
cbh03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CLC_0182 (rho)
Messenger RNA biogenesis [BR:
cbh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CLC_0182 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
S1CSD-TOTE-2
Spore_III_AA
SAP
AAA_22
AAA_25
HeH
Motif
Other DBs
NCBI-ProteinID:
ABS35923
LinkDB
All DBs
Position
164856..166301
Genome browser
AA seq
481 aa
AA seq
DB search
MINKDYESMTVKELREIAKKLDIKNISKFKKNELIEEIKTSKSTAIEKDGKILVEKISPK
IIKSENNIHSKITKENGINEEKTSSLMKNNEENKAERLKEMINESQRAKGVLEIIENNNY
GFLRGQNYLSGPEDIYIYPSQIRRFNLRTGDEVEGKVRIPKDGEKFKALIYVERVNGENP
EKAVGRKPFESLVPIYPNERIKLETNSQDLSTRLMDIISPIGKGQRGMIVAPPKAGKTTL
LKKIAQSISRNNPLCKLIVLLIDERPEEVTDMQRSIKGEVIYSTFDEEPEHHTKVTYMVL
ERAKRMVEQGQDVVILLDSITRLSRAYNLTITPTGRTLSGGLDPGALVMPKKFFGAARNI
ENGGSLTILATALTETGSRMDDMIFEEFKGTGNMEVHLNRKLQERRIFPALDIYKSGTRR
DDLLFTDSLEKETAFNIRKLLYEENNVENVTEQVLSILSKTKTNEEFVNIISKMDMNKNN
R
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
ttgataaataaggattatgaaagtatgaccgttaaagagttaagagaaatagctaaaaag
cttgatataaaaaatatttctaagttcaaaaaaaatgaattaatagaagaaataaaaact
tcaaagtcaacagccatagagaaagatgggaaaattttagttgaaaaaatatcacctaaa
atcataaaaagtgaaaataatatacatagcaaaataactaaagaaaatggtattaatgaa
gaaaaaaccagttcacttatgaagaataacgaagaaaataaagctgaaaggctaaaagag
atgataaatgaatctcaaagagctaagggtgttttagagattatagaaaataataattat
ggatttctaagaggacaaaattatttgtcaggcccagaagatatatatatatatccatcg
caaataagaagatttaatttaagaacaggtgatgaagttgaaggaaaggttagaatacca
aaggatggagaaaaatttaaagccttaatatatgtagaaagggtaaatggagaaaatcct
gagaaagcagtaggaagaaaaccttttgaaagcttagtacctatatatcctaatgaaagg
attaaacttgaaacaaattcacaagatttatctacacggctaatggatataatatcacct
ataggtaagggacaaagaggaatgatagtagcccctcctaaagcaggtaaaactactctt
ctaaaaaagatagcccaaagcatttcccgaaataatccattatgtaaacttatagtactt
ttaattgatgagagaccagaagaagtaacagatatgcaaagatctattaaaggagaagta
atatactcaacctttgatgaagagccagaacatcatacaaaggttacttatatggtttta
gaaagagctaaaagaatggtagagcaaggacaggatgttgttatattattagatagtata
acaagattgtctagagcatataatttaactattacaccaacaggtaggacattatcaggc
gggttagatcctggtgcattagtaatgccaaagaaattcttcggtgctgctagaaacatt
gaaaatggtgggagtttaaccatattagctacagctttaactgaaacaggaagcagaatg
gatgatatgatatttgaggagtttaagggtactggaaatatggaagtacatcttaataga
aaacttcaagaaagaagaatattccctgctttagatatttataaatcaggtacaagaagg
gatgatttattgtttacagattctttagaaaaagaaactgcatttaacataagaaagctt
ctttatgaggaaaataatgtagagaatgtaactgaacaagttttaagtatattatctaaa
actaagactaatgaggaatttgtaaacataataagcaaaatggatatgaataaaaataat
agatag
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