Clostridium botulinum A Hall: CLC_0546
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Entry
CLC_0546 CDS
T00575
Symbol
sbcD
Name
(GenBank) exonuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
cbh
Clostridium botulinum A Hall
Brite
KEGG Orthology (KO) [BR:
cbh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbh03400
]
CLC_0546 (sbcD)
DNA repair and recombination proteins [BR:
cbh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CLC_0546 (sbcD)
Archaeal homologous recombinant proteins
CLC_0546 (sbcD)
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
FBPase_2
DUF7235
Hat1_N
Motif
Other DBs
NCBI-ProteinID:
ABS38531
UniProt:
A5HZ16
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All DBs
Position
551812..553041
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AA seq
409 aa
AA seq
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MRILHTSDWHLGKNLEGFSRMDEQERFIEDFINIVDKNNIDMVIIAGDIYDNGNPPARAE
KMFYDCIKKISNKGERLVLIIAGNHDNPERLVAASSLAYDEGIILMGTPKTIVPKGKYGN
FKVINSDLACLEIGVKEEKAVIISLPYPSEKRLNEILSKEMDNDEDRRKTYSERIGDIFS
NLQEKYYKDNTVNLAISHIFVNGSEETDSERPIQLGGSLSVDVDKLPKKAQYIGLGHLHK
PQKVRGIDNAYYSGSPLPYSKSERGYSKGCKIIDVHPGEKAVIEEVYFNNYKPIEVWHCN
GIKEAINKCEENKEKDMWLYLHIKTKEYISTEDIKALKEIKKDIVEIVPEIEEKREETFN
GNIKEKSMAELFKSFYLNQRGIEASEELMDLFLSIAQEEDEYETEETCD
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgagaatattgcatacctccgattggcacttgggaaagaaccttgaaggctttagtaga
atggatgaacaggaaagatttatagaggattttattaacattgtggataaaaataatata
gatatggtgataatagctggagatatatatgataacgggaatccaccggctagagcagaa
aaaatgttttatgattgtataaaaaaaataagcaataagggagaaagattagttttaatt
atagcaggtaatcacgataatccagaaagattagttgctgcaagttctttagcctatgat
gagggaataatacttatggggacccctaagactatagttccaaagggaaagtatgggaat
tttaaggtaataaattcagatttagcctgtttagaaataggggtaaaggaagaaaaggca
gtgattatatctttaccttatcctagtgagaaaagattaaatgaaatactgtctaaagaa
atggataatgatgaggatagaagaaaaacttattcagaaaggataggagatatattttct
aatttacaggaaaaatattataaagataacactgttaatttagctatttctcatatattt
gtaaatggatcagaggaaacggattctgaaaggccaatacaacttggagggagtctatca
gtagatgtagacaagttacctaaaaaagcacaatatataggccttgggcatcttcataaa
ccacaaaaggtaagggggatagataatgcctattattctggttcaccactgccttatagt
aaaagcgaaagaggatatagtaaaggatgcaagataatagatgtacatccaggggagaaa
gctgttattgaagaggtttattttaataactataaacctatagaggtgtggcattgcaac
ggtataaaagaggctataaataaatgtgaagaaaataaagaaaaggatatgtggctatat
ttacatataaaaacaaaggaatatataagtacagaagatataaaagccttaaaagaaata
aaaaaagatatagtagagatagtaccagaaatagaggaaaaaagagaagaaacttttaat
ggaaatataaaagaaaaatctatggcagaattatttaaatccttttatttaaatcaaaga
ggaatagaggctagtgaagaattaatggatttatttttaagtatagctcaagaggaggat
gaatatgaaaccgaagaaacttgtgattaa
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