Clostridium botulinum A Hall: CLC_0547
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Entry
CLC_0547 CDS
T00575
Symbol
sbcC
Name
(GenBank) exonuclease SbcCD, C subunit
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cbh
Clostridium botulinum A Hall
Brite
KEGG Orthology (KO) [BR:
cbh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbh03400
]
CLC_0547 (sbcC)
DNA repair and recombination proteins [BR:
cbh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CLC_0547 (sbcC)
Archaeal homologous recombinant proteins
CLC_0547 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_27
ABC_tran
ATP_bind_1
GFO_IDH_MocA_C2
Motif
Other DBs
NCBI-ProteinID:
ABS36333
UniProt:
A5HZ17
LinkDB
All DBs
Position
553016..556546
Genome browser
AA seq
1176 aa
AA seq
DB search
MKPKKLVIKGLNSFIEKQEIDFETLVNRGLFGIFGPTGSGKSSILDAITMALYGDIARDS
TQFINLDTDSLFVSYEFQIASVDERDDYIVSRTVKRDKKGGYKTTAARLVKNTYEEEEII
ADKPRDIQKNIESIIGLTAEDFTRSVVLPQGKFSEFLKLSGKSRRDMLERIFGLEKYGKK
LLERIRKARNKEISSLTLIEGRLEQYKDISKEKLQELKIQYENLLKEKSKIAKEKEESNK
LYEKYKNIWELQEELNIYLNKLENLKKGLLNIEEKRIKVEKGKNALSVKPYIDELSKIES
DRNINEEELQTAMEQLRNIDLNLKNIEEEYKKASEDKEEKIPLLMQKENNLLQAIEIKKK
VEVIKRERADLVQKYKEKESLIRNKNIDKKHIEENINKISKEVKLKEEEINSLKIDGDRR
EKIQKLYEIDKEYKRLNLEVCNITERINIKIKSLKEYELKYKDTLETQRDINKKLEYVSG
KREDLIKNSPGNNDILLDKKDYINKLMEIFNDLNKINDRKQELEKNLKEKQVVKLNLEKQ
HKEILEILKLKEETIVSLEEKIKDIEKMDMASILATNLKDQEPCPVCGSMHHIKLAKKVD
IKELEILKEDHRNAFKKLENIKIEEKEKNILLISVEKEEELILEELENLKEQLKGRNLED
LRGELQKEKNDFEKLNENIKDWEKEKLILEENINKLQKEKNDIDKEEAKNHEAISKEKEL
IASIKKDMEEREILFKEKEKEYLNLKEEIKVSNVEEEISRVRASDKKIEEYNKVIKNERE
ILESENNKREETIKQINIMEIELGKIIEAGKEKKNFIDKEEEEIKKLNVGEISIEHLDQV
KKSIGNIKEKEEILKSKLELEGKNREILWKNKISKEQIKINLEKLHNEKYIQLNKVLEEN
KFHTLEDAKLMLICKEEIKELEKEIEEFEKEYNSLNINIERVNKKLKGERIEEGSWKDIR
LKKENKEKELEDIIKNIVIEEKLISDMENNIKSLKNLLDEKEKVAHKKALLEDIDKLVQG
NKFVEFVAMNQLEYIVFEASKRLKDITRGRYALELDCNGNFTMRDDFNGGGIRPTNTLSG
GETFLTSLALALALSSQIQLKGSSPLEFFFLDEGFGTLDSELLDTVMTSLENLRSDRLSV
GIISHVEELKNRVPIKLIVDPAVPGEGGSKIKIEYS
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgaagaaacttgtgattaaaggactaaacagttttatagaaaaacaggaaata
gactttgaaactttagtcaatagaggtttgtttggcatatttggccctacaggcagtgga
aaatccagtatattagatgctataactatggctttatatggagatatagcaagagatagt
actcagtttataaatttagatacggattctttatttgtaagctatgagtttcagatagcc
tcagtagatgaaagagatgattatattgtttctagaactgtaaaaagagataaaaaaggt
ggttataagactaccgcagctaggttagttaaaaatacttacgaggaagaagaaataata
gcagataagccgagagatatacaaaaaaatatagaatctataataggattaaccgcagaa
gattttactcgttcagtagtgttgccacaaggtaaatttagtgagttcttgaagttaagt
ggaaaaagtagaagagatatgttagagagaatatttggattagagaagtatggcaaaaaa
cttttagaaaggataagaaaagcaagaaataaggaaatatcctctttaacattaatagaa
ggaagattagaacagtataaagatatatccaaggaaaaattacaggaactaaaaatacaa
tatgaaaatttgttaaaagaaaaatctaaaatagcgaaagaaaaagaagaaagcaataag
ctttatgaaaagtataaaaatatatgggaacttcaagaggaattaaatatttatttaaat
aaattagaaaatcttaaaaaagggttgctaaatattgaagagaaaagaataaaagtagaa
aagggaaagaatgcattaagtgttaaaccctatatagatgaacttagcaaaattgaatca
gatagaaatataaatgaagaggaattacaaactgcaatggagcagttaagaaatatagat
ttaaatttaaaaaatatagaagaagaatacaagaaagcatcagaggataaagaagaaaaa
atacctttattaatgcagaaagaaaataatttactacaggctatagaaataaagaagaag
gttgaagttataaaaagggaaagagcagatttagtacaaaaatataaggaaaaggaaagc
ttaataagaaacaaaaatatagataaaaagcatatagaggaaaatataaataagatttct
aaggaagtaaaattaaaagaagaagaaataaattcattaaaaatagatggagacagaaga
gaaaagatacaaaaactatatgaaatagataaagaatataaaagattaaatttagaagtt
tgcaatataacagaaagaataaatataaaaataaagagcttaaaagagtatgaattaaag
tataaagatacattagaaacacaaagagatataaataaaaaattagaatatgtttcaggc
aaaagagaagatttaataaaaaactctcctggtaacaatgatattttgcttgataaaaaa
gattatataaataaattaatggaaatttttaatgatttaaataaaataaatgatagaaaa
caggaattagaaaaaaatttaaaagaaaaacaagtagtaaaattaaatttagaaaaacag
cataaagaaatattagaaatattaaagcttaaagaagaaacaattgtaagtctagaggaa
aaaataaaagatatagaaaaaatggatatggcctccatattagctactaatttaaaggat
caagaaccttgtcctgtatgtggatctatgcatcatattaaattagctaaaaaggttgat
ataaaagaattagaaattctaaaagaagatcatagaaatgcatttaaaaaattagaaaat
ataaaaatagaagaaaaagaaaaaaatatacttttaatttctgtggaaaaagaagaagaa
ttaatattagaggaattagaaaatttaaaagagcaattaaaaggtagaaacttagaggat
ttaaggggagaactacaaaaagaaaaaaatgattttgaaaaattaaatgaaaatataaaa
gactgggaaaaagaaaaattaatattagaagaaaatataaacaagctacaaaaagaaaaa
aacgatatagataaagaggaagctaaaaatcatgaagctatatcaaaggaaaaagaatta
atagcttctataaaaaaggacatggaagaaagagaaatattatttaaggaaaaagaaaaa
gaatatttaaatttaaaagaagaaattaaagtttctaatgtggaagaagaaataagtaga
gttagagcttctgataaaaaaatagaggaatataataaggttataaaaaatgaaagagaa
attttagagagtgaaaataataaaagagaagaaacaattaaacagataaatattatggaa
atagagctaggcaaaataatagaagcgggaaaagaaaagaaaaattttatagacaaagaa
gaggaggaaataaaaaaattaaatgtgggagagatttctatagaacatttagaccaagta
aaaaaatccataggaaatataaaggaaaaagaagaaatcttaaaatctaagttagagttg
gaaggtaaaaacagagaaatattatggaaaaataaaataagtaaagaacaaataaaaatt
aacttagaaaaacttcataatgaaaaatatattcagttaaataaggtcttagaggaaaat
aaattccatactttagaagatgcaaaattaatgttaatatgtaaagaagaaataaaagag
ctagaaaaagagatagaagaatttgaaaaagagtataatagtttgaatataaatatagaa
agagtaaataaaaaattgaagggggaaaggatagaggaaggaagttggaaagatataagg
cttaaaaaagaaaataaggaaaaagagctagaagatataattaagaatattgtaatagaa
gaaaagcttataagtgatatggaaaataatataaagtcattaaagaacttattagatgaa
aaagaaaaggtagctcataaaaaggctttattagaagatatagataaattagttcaggga
aataaatttgtagagtttgtggctatgaatcagttagagtatatagtttttgaagcttct
aaaagacttaaggatataacgagaggaagatatgcattagaattagattgtaatggaaac
tttactatgagggatgactttaatggagggggtataagacctacaaatactttgtctgga
ggggaaaccttcttaacatcattggcactagctttggcgctatcttcacagatacaacta
aaaggaagctcccctttagaatttttctttttagatgagggatttggaactttagatagt
gagcttttagatacagttatgacttccttagaaaatttaagaagtgatagattaagtgta
ggaataataagtcatgtagaggaacttaaaaatagagtaccaataaagcttatagtagat
cctgcggtaccaggagagggtggaagtaaaataaaaatagagtatagctag
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