Clostridium botulinum A Hall: CLC_1451
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Entry
CLC_1451 CDS
T00575
Name
(GenBank) helicase, UvrD/REP family
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cbh
Clostridium botulinum A Hall
Pathway
cbh03420
Nucleotide excision repair
cbh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cbh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CLC_1451
03430 Mismatch repair
CLC_1451
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbh03400
]
CLC_1451
Enzymes [BR:
cbh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CLC_1451
DNA repair and recombination proteins [BR:
cbh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CLC_1451
MMR (mismatch excision repair)
Other MMR factors
CLC_1451
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
AAA_12
AAA_11
DEAD
AAA_30
ResIII
AAA_22
AAA_29
Flavi_DEAD
DUF3921
Motif
Other DBs
NCBI-ProteinID:
ABS39247
UniProt:
A5I1P6
LinkDB
All DBs
Position
1510444..1512456
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AA seq
670 aa
AA seq
DB search
MIDYSFLDQYQKEAVKCHKNNTLVVAPPGSGKTTVIINRVVHLIEDLKINPNNILVITFT
RAAAMNMKERYKKISVSRKIPFFGTFHGLFYKILNRHFKNINIISSKEVYSLINNILISY
LDSVNEDKVRDVLNDISLFKTSGLNMKDFVPKIDKSIFEHCFNSYEEYKDKKELLDFDDL
QINIFKLLKEDERILKGYNKLFKYILVDEFQDCDTLQINILQMLSEGNSLFAVGDEDQCI
YSFRGSKPECMVDFNHYFKKGEKIYLRYNYRSPKNIVGISKNLIKNNKLRNNKRIEAYND
YDKNIVLKSFLNEREQAEEISKIINDIIKKGYGYKDVAILYRTNMESRSLTDLFFKKRIP
FRLLDKGYNFFNHFVCRDILAYMQVCIDSYDKKSFLKIINKPFRYISKLNVERVRRYKYA
KNSFDILKEQKDIQPFQIKNLENLEKDINKMNKMSAQDAIGHIIHNLGYEEYIKEYSERI
KIDKEELLQIVDELKEAAEEYTSILSFLVHVEEVEKEINKKEINEDSVILSTIHGVKGME
FKNVVIVNCNEGNIPYSKADEEVNIEEERRLFYVGITRAKENLYLTVPKVIRGKNKENSN
FIKECKLDKELLENDYFKGKEIVIHKVFGEGIIENQGEDYVEIGFLDGTKRKFDRNVITK
SNIIKKKSVS
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgatagattatagtttcttagatcagtatcaaaaggaagcggttaaatgtcataagaat
aatacattagtggtagctccacctggttccggtaaaaccactgttattataaatagagtt
gtgcatttaatagaagatttaaaaataaatcctaataatatattagtaataacttttact
agggctgcagctatgaatatgaaggaaagatataaaaaaataagtgtcagtaggaaaata
cctttttttggaacatttcatggccttttttataaaatattgaacagacactttaaaaat
ataaatataataagtagcaaggaagtctattctctaataaataatatacttatatcttat
ttggattctgtaaatgaggataaggtaagagacgttttaaatgatatatcactttttaaa
actagtgggttaaatatgaaggattttgttcctaaaattgataaaagtatatttgaacac
tgttttaatagctatgaagagtataaagataaaaaggaacttttagattttgatgatttg
caaattaatatatttaaacttttaaaggaagatgaaagaattcttaagggttataataaa
ctatttaaatatatattagtagatgaatttcaagattgtgatacattgcaaataaatatt
cttcaaatgttaagtgagggaaattctctattcgcagtaggggatgaggatcagtgtata
tattcctttagaggatctaagccagagtgtatggtagattttaatcattattttaaaaaa
ggagaaaagatatatctaagatataattatagaagtcctaaaaatatagtagggatttct
aaaaatcttattaaaaataataaattaagaaataataagagaatagaagcttataatgat
tatgataagaatatagtgttaaaatcctttctgaatgaaagggagcaagcagaggaaata
agtaaaataattaatgatattataaagaagggctatggatataaagatgtagccatactt
tatagaactaatatggaaagtagaagtttaacagatttgttttttaaaaaaagaatacct
tttagacttttagataagggttataatttttttaatcattttgtatgtagggatatacta
gcttatatgcaagtttgtatagattcctatgataagaaaagttttttaaagattataaat
aaaccctttaggtatataagtaaattaaatgtggaaagggtaagaagatataaatatgct
aaaaatagctttgatatattaaaggaacaaaaggatatacaaccttttcaaattaagaat
ttagaaaatcttgaaaaggatataaacaaaatgaataaaatgagtgcccaagatgccata
ggtcacataatccataatttaggctatgaagagtatattaaagaatatagtgaaagaata
aaaatagataaagaagaacttttacaaatagtagatgaattaaaagaagcagctgaagaa
tatacaagtattttaagctttttagttcatgtagaggaagtagaaaaagaaataaataaa
aaagaaataaatgaagatagtgtaatattaagtacaatacatggggttaagggcatggaa
tttaaaaatgtagttattgtgaattgtaatgaaggtaatattccttacagtaaagcagat
gaagaagttaatatagaggaagagagaagacttttttatgtaggtatcacaagggcaaaa
gaaaacttatatttaactgtaccaaaggttataagagggaaaaataaagaaaactctaat
tttataaaggaatgcaagttagataaagaattattagaaaatgattattttaaaggaaaa
gaaatagtgattcataaggtatttggtgaaggaattattgaaaatcaaggggaagattat
gtggaaataggatttttagatggaactaaaagaaaatttgatagaaatgttataactaaa
agtaatattattaaaaagaaaagtgtatcataa
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