Clostridium botulinum A Hall: CLC_1749
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Entry
CLC_1749 CDS
T00575
Name
(GenBank) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase / ribosomal protein S1 homolog
KO
K02945
small subunit ribosomal protein S1
K03527
4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:
1.17.7.4
]
Organism
cbh
Clostridium botulinum A Hall
Pathway
cbh00900
Terpenoid backbone biosynthesis
cbh01100
Metabolic pathways
cbh01110
Biosynthesis of secondary metabolites
cbh03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
cbh00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
CLC_1749
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
CLC_1749
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
cbh03011
]
CLC_1749
Enzymes [BR:
cbh01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.7 With an iron-sulfur protein as acceptor
1.17.7.4 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase
CLC_1749
Ribosome [BR:
cbh03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
CLC_1749
Bacteria
CLC_1749
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LYTB
S1
S1_RRP5
Spt6_S1
OB_RRP5_4th
S1_2
CsrA
Motif
Other DBs
NCBI-ProteinID:
ABS38985
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All DBs
Position
complement(1855455..1857371)
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AA seq
638 aa
AA seq
DB search
MNVILADKAGFCFGVKRALDTTINTKENLKGKIYTLGPLIHNNDVVNLLKDKGIEPISIQ
DVDKLNKDDTIIIRSHGVPLQTINYLKDKGLNVINTTCPHVANIQIKAKKYYEEGYKIVI
VGDENHPEVIGINGWCNNSAIISKDGANINNLDKKVCVLCQTTEKQENWEKVLTILIKNS
REILAFNTICNATQVRQQSAKKLSEKVDSMIVIGGKNSSNTTKLYEICKSNCKNTIHVEN
AKEIPEHIYKNSNIIGVTAGASTPDWIIKEAINKMNNNDSIIEVSKNEMLNYMNEKEQQI
VVGKVVKGTIVSLNENELFVDLSYKSEGIIPKEEVTLDEESILKESFKVGDEIEAKIVRI
KNEDGYVVLSLKELHREKVLKNLKEAFENKQTIKVIVKDAVDAGLICIYNGVRVFIPASH
IELSHVDDLEAYKGLELEVNIIEFIKDRYRTKIVGSRRNILKTIRNKHIEETWNSLEKDT
VVEGEVKRFTDFGAFIEINGVDGLLHVSEISWGRVEKPEDALKIGDKIKVYILDIDKENK
KLALSIKKLIQDPWKSVEIKYPIGNIVLGKVVRFANFGAFIELEPGVDGLVHISKISNKR
IDKPEEELTLGKEVKAKILEVNSVEKRIALSIKDVEEF
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtaattttagcagataaagcaggattttgctttggtgttaaaagggctttagat
acaacaataaataccaaagaaaatttaaagggtaaaatttatactttaggtcctttgata
cataataatgatgtggttaatcttttaaaagacaaaggtatagaacctataagtatacag
gatgtagataaacttaacaaagatgatactattattataagatctcatggagtaccactt
caaactataaactatttaaaagacaaagggttaaatgttataaatacaacctgccctcat
gtggccaatatacaaattaaagctaaaaaatattatgaagaaggttacaaaatagtaata
gttggagatgaaaatcatccagaggttattgggataaatggttggtgtaataattctgct
attatctcaaaggatggtgccaatataaataacttagataaaaaagtttgcgtattgtgt
caaaccacagaaaaacaagaaaattgggaaaaggtccttactatattaattaaaaactct
agagaaatattagcttttaatactatatgtaatgcaacacaagtgcgccaacaatctgca
aaaaaattatctgaaaaagtggatagcatgatagttataggtggtaaaaatagttctaat
actactaagctttatgaaatatgtaaaagtaattgcaaaaatacaatacatgttgaaaat
gcaaaggaaatacctgagcacatatataaaaactcaaatattataggcgttactgccgga
gcatctacaccagattggattataaaggaggctattaataaaatgaataataatgatagt
ataatagaagtatcaaaaaatgaaatgcttaactatatgaatgaaaaggagcaacaaata
gtagttggaaaagtagtaaaaggaactatagtttctttaaatgaaaatgagttatttgtt
gatttaagctataaatctgaaggcattatacctaaagaagaagtaactttagatgaagaa
tctatattaaaagaatcctttaaggtaggagatgaaatagaagccaaaatagttagaata
aaaaatgaagatggatacgtggtactatccttaaaggaattgcatcgtgaaaaagtctta
aaaaatttaaaagaagcctttgaaaataaacaaactataaaagttattgtaaaagatgcc
gttgatgctggattaatatgtatatataatggtgttagagtatttattccagcttctcat
atagaactttcccatgtagatgacttagaggcatataaaggcttagaattagaagttaat
atcattgaatttataaaagataggtatagaactaaaatagtaggttcaagaagaaacata
ttaaaaactattagaaataaacatatagaagaaacttggaactctttagaaaaagataca
gtagtagaaggagaagtaaagagattcacagactttggagcttttatagaaattaacgga
gtggatggtttactacatgtttcagaaatatcctggggaagagtagaaaagccagaagat
gcattaaaaataggagataaaataaaagtatatattttagatattgataaggaaaataaa
aaactagctttaagcataaaaaaattaatacaagatccttggaaaagtgtagagataaaa
tatccaataggaaatatagtattaggaaaagtagttagatttgcaaactttggagctttt
atagaattagaacctggtgtagatggcctagtgcatatatcaaaaataagcaataaaaga
atagataaaccagaagaagagttaactttaggaaaagaagtcaaagctaaaatactagaa
gttaattcagttgaaaaaagaattgcattaagtataaaagacgttgaagaattttaa
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