Clostridium botulinum A Hall: CLC_1957
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Entry
CLC_1957 CDS
T00575
Name
(GenBank) ATP-dependent RNA helicase, DEAD/DEAH box family
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cbh
Clostridium botulinum A Hall
Pathway
cbh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLC_1957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbh03019
]
CLC_1957
03009 Ribosome biogenesis [BR:
cbh03009
]
CLC_1957
Enzymes [BR:
cbh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CLC_1957
Messenger RNA biogenesis [BR:
cbh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CLC_1957
Ribosome biogenesis [BR:
cbh03009
]
Prokaryotic type
rRNA helicases
CLC_1957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SecA_DEAD
Cas3-like_C_2
OST48_N
Motif
Other DBs
NCBI-ProteinID:
ABS38400
UniProt:
A5I3D5
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All DBs
Position
2078058..2079188
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AA seq
376 aa
AA seq
DB search
MIKFEELGLSDSIIDVLKKQRIIEPTPIQEESIMLIKSGNDVIAEAQTGTGKTLAFLLPM
FENISPDIDAIQGLIITPTRELAIQITEEAMKLKEAKDLNILAAYGGKDIGSQIKKLKNN
IHLVIATPGRLLDHLNRNTLNFKDLKTLVLDEADEMLLMGFKNDVRSIIENTPRKRQTLC
FSATMNSEVKKLAYKNMRDPKLIIIEKEEVTLKNIKQVLIETTDRRKQEDLCKILDEENP
FMAIIFCRTKRRVDTLEEALYKKGYNCEKLHGSITQPKRERIMRSFKNLEIQYLIATDVA
ARGLDITGVTHVFNYDIPENAESYIHRIGRTGRAGEKGYTFLFVAPKDEQTLGMIEKEIK
FKIPRRALTNSKEDNK
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgataaaatttgaagaactaggtcttagtgatagtataatagatgttcttaaaaagcaa
agaatcattgagccaacaccaattcaagaagaaagtattatgttgataaaaagtggtaat
gatgttatagctgaagctcaaactggaactgggaaaacccttgcatttttacttccaatg
tttgaaaatatatctcctgatatagacgcaattcaaggtttaataataacacctacaaga
gaacttgctatacaaataactgaggaagctatgaagttaaaagaagccaaagatttgaat
attttagctgcctatggtggtaaagatataggctcacaaataaaaaaacttaaaaataat
atacatttggtaattgcaactcccggtagacttttagatcatcttaatagaaacacacta
aattttaaagatttaaaaacattagtattagatgaagctgatgaaatgctccttatggga
tttaagaatgatgttcgatctattatagagaatacaccaaggaaacgccaaacactatgt
ttttcagcaacaatgaattctgaagttaaaaagctagcctataaaaacatgcgtgatccc
aaactaataataatagaaaaagaagaagtaactcttaaaaatatcaaacaagttttaata
gaaaccactgacagaagaaagcaagaggatttgtgcaaaatattagatgaagaaaatcca
tttatggctattatcttttgtagaaccaaaagaagagttgatactcttgaggaagcactt
tataaaaagggttataactgtgaaaagcttcatggtagcataactcaaccaaagcgtgaa
agaataatgcgttcctttaaaaatttagaaattcaatatttaatagctacggatgtagca
gctagagggcttgatataactggtgttactcatgtttttaactatgatattccagaaaat
gccgaaagctatatacaccgtataggcagaactgggagagctggtgaaaagggatataca
ttcctatttgtagcacccaaagatgaacaaactttaggtatgatagaaaaagaaattaaa
tttaaaattcctagaagagctttaacaaattctaaagaggataacaaataa
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