Clostridium botulinum A Hall: CLC_2259
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Entry
CLC_2259 CDS
T00575
Symbol
pnpA
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cbh
Clostridium botulinum A Hall
Pathway
cbh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLC_2259 (pnpA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbh03019
]
CLC_2259 (pnpA)
03016 Transfer RNA biogenesis [BR:
cbh03016
]
CLC_2259 (pnpA)
Enzymes [BR:
cbh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CLC_2259 (pnpA)
Messenger RNA biogenesis [BR:
cbh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CLC_2259 (pnpA)
Transfer RNA biogenesis [BR:
cbh03016
]
Prokaryotic type
tRNA degradation factors
CLC_2259 (pnpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
PNPase
RNase_PH_C
KH_1
KH_2
PCB_OB
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
ABS36368
UniProt:
A5I4I7
LinkDB
All DBs
Position
complement(2386944..2389052)
Genome browser
AA seq
702 aa
AA seq
DB search
MIHTLETTVAGRKMKVDFGKTGMLSNAAIFMSYGDTVVMINANASKEPREGIDFFPLSVE
YEERLYSVGKIPGGFIKREGKPSDKSILHARSIDRPLRPLFPKGYRNDVQIVNTVLSVEQ
DNLPEILAINGSSLALCLSSIPFTTPVAAVSVGLVDGEFIINPTVAQRENTILDLTVCAT
KERVMMVEAGGQEIDEETMYSAIMFGFEECKNIVAFQEEAVAKFGKTKNEPVLYKADEEV
EKEVKSFAFDMIKEAMYIMDKDERNAQLDKVKEKISEEFSEKYEDKVADIAEVIYKTQKE
IVRNMLLNEDRRPDGRAFDEVRPISCEVGILPRTHGTGLFTRGLTQVMTVATLGALGDVQ
ILDGIAEEESKRYMHHYNFPSYSVGEVRPLRGPGRREIGHGALAERALEPLIPSQSEFPY
TIRLVSEVLSSNGSTSQASVCGSTLALLDAGVPIKRPAAGIAMGLITSEDLEKEKVITDI
QGIEDFFGDMDFKVAGTEKGITSIQFDTKIKGLSNSCVKDALEGAKKARLHILGKIKECI
PEPRKELSKYAPRTEIICIDPEKIRDVIGAGGKVINKIIADTNVKIEIKEDGKIFVTSNN
EPEGVKKAISIIEGLTKEVVQGEIYLGKVTKTTNFGAFVEILPGKEGLVHISKLDFARVE
KVEDVVSVGDEILVKVTDIDNQGRINLSRKDAIAKKEEEKDK
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgattcatacattagaaactactgtagcaggaagaaaaatgaaagtagactttggtaag
acaggaatgctttcaaatgctgccatattcatgagttatggagatacagtagttatgata
aatgccaacgcttctaaagagccaagagagggaatagattttttcccattaagcgttgaa
tatgaagaaagactatattcagtaggaaagattccaggaggattcatcaaaagagaagga
aaaccttctgacaaatctatattacatgccagatctatagatagaccattaagaccttta
ttcccaaagggatacagaaatgatgttcaaatagttaatacagttttatctgtagaacag
gataatttaccagaaatattagctataaatggctcctctttagctctatgcctatctagc
ataccatttacaacaccagtagctgcagtttctgtgggattagtagatggagaatttata
ataaatccaactgtagcccaaagagaaaatactatattagatttaactgtatgcgctaca
aaagaaagagttatgatggtagaagcaggtggacaggaaatagatgaggaaactatgtat
agtgctatcatgtttggttttgaagaatgcaaaaatatagttgcattccaagaagaggct
gtggctaagtttggaaaaactaaaaatgaaccagtattatacaaagctgacgaagaagta
gaaaaagaagtaaaaagctttgcttttgatatgataaaagaagctatgtatataatggat
aaagatgaaagaaatgctcagttagataaagttaaagaaaaaatatcagaagagttttca
gaaaaatatgaagacaaagtggcagacatagcagaagttatatataaaactcaaaaagaa
atagttagaaacatgcttttaaatgaagatagaagaccagatggaagagcttttgatgaa
gtaagacctataagctgtgaagtgggaatacttccaagaactcatggtacgggtttattt
acaagaggattaactcaagtaatgactgtagctactttaggagctttaggagatgttcaa
atattagatggtatagcagaggaagaatcaaaacgctacatgcatcattacaatttccca
tcctatagtgtaggagaagttagacctttaaggggacctggaagacgtgaaataggtcat
ggagctttagcagaaagagctttggaaccattaattccatctcaatcagagttcccatac
actataagattagtatcagaagtactaagttcaaatggttcaacatcacaggcaagtgtt
tgcggaagcacattagctctattagatgcaggtgtacctataaaaaggccagccgcaggt
atagctatgggacttataactagtgaagatttagaaaaggaaaaagtaataacagacatt
caaggtatagaagatttctttggagatatggactttaaggtagcaggaacagaaaaaggg
attacatctatacaatttgatacaaagataaaagggttatcaaatagttgtgtaaaggat
gcattagaaggcgcaaaaaaggcaagactacacatattaggaaaaataaaagaatgcata
ccagaaccaagaaaagaattatctaaatatgcaccaagaacagaaataatatgtatagat
ccagaaaaaataagagatgttataggtgctggtggaaaggtaataaataaaataatagca
gataccaacgtaaaaatagaaataaaagaagatggaaaaatatttgtaacatctaataat
gagcctgaaggtgttaagaaagctataagtataatagaaggattaacaaaggaagtagtt
caaggagagatttatctaggtaaagtaactaaaactactaattttggagcctttgtagaa
atactgccaggtaaagaagggctagttcatatatctaaattagattttgctagagtagaa
aaagtggaagatgtagtatctgtaggagatgaaatattagttaaggttacagacatagat
aatcaaggaagaataaatttatcacgcaaagatgctattgccaagaaagaagaagaaaaa
gataaataa
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