Clostridium botulinum A Hall: CLC_3214
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Entry
CLC_3214 CDS
T00575
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cbh
Clostridium botulinum A Hall
Pathway
cbh03420
Nucleotide excision repair
cbh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cbh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CLC_3214 (pcrA)
03430 Mismatch repair
CLC_3214 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbh03400
]
CLC_3214 (pcrA)
Enzymes [BR:
cbh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CLC_3214 (pcrA)
DNA repair and recombination proteins [BR:
cbh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CLC_3214 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
CLC_3214 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
AAA_12
Motif
Other DBs
NCBI-ProteinID:
ABS37661
UniProt:
A5I6Z8
LinkDB
All DBs
Position
complement(3349593..3351809)
Genome browser
AA seq
738 aa
AA seq
DB search
MDLKNKLNKEQYEAAITIDGPLLILAGAGSGKTRVLTYRIAHMIENLNIYPSKILAITFT
NKAAGEMKERIKALVGDVVEGMWVSTFHSSCVRILRREIDKLGYDKNFTIYDTYDQKTLV
KQCMEELNINDKEITDREIINTIGNQKDNLISPKEFKKISNGNYRKDRIADAYILYQKKL
KTNNALDFDDLIYKTVELFKTNKDVLEFYQRKFKYIMVDEYQDTNKSQYELVKLLALVHR
NMCVVGDDDQCIYEWRGADISNILNFEKDYKEAKVIKLEQNYRSKGNILNAANEVIKNNS
QRKNKVLRTENENGNKIKVFRAYSDIDEAKFVASEIKKIIKDSERSFNDFAVLYRTNAQS
RIFEDVFMKRDIPYRLIGGLKFYDRKEIKDLMAYLKLINNPLDDISLRRIINVPKRSIGD
ATVKKVQEFANEMDECMYSVLLDADQILTLSQRSITSIKKFVSIMNSFIRKKDEISVSAL
IKEILEETGYLKELKNSKNPDDVSRVENLKELVSAAADFERESEDKSLGAFLEKVALVTD
IDNYDENSDSVAMMTVHSAKGLEFPVVFMVGMENGIFPGTQSLSDPKEMEESRRLCYVAI
TRAKEQLYITSAEIRKVFGRTVAYALSDFVSEISKDLKDNVNITGEVATDKVLHKNFGIR
SQKTNSINSYKSPSLNNIPKNNVDSNKLNVGLKVKHKDFGIGTIVSMSKVSDDIKLTIAF
DRRGVKILMLSMAPIEAV
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaaaaataaattaaataaagaacaatatgaagctgctattactatagatggg
cctttactaatactcgcaggagcaggttcaggcaagacaagggttttgacttatagaata
gcccacatgatagaaaatttaaatatatatccttctaaaattttggccataacttttaca
aataaggctgctggagaaatgaaagaaagaataaaggctttagtaggggatgtggtagaa
ggaatgtgggtttctacatttcactctagctgtgtaaggattttaagaagagaaatagat
aagttaggttatgataaaaattttactatatatgatacttatgatcaaaaaactttagtt
aagcaatgtatggaagaattgaatataaatgataaagaaatcacagacagagaaataata
aataccataggcaatcaaaaggataatttaatatcacctaaggaatttaaaaaaatttct
aatggaaattatagaaaagatagaattgcagatgcatatattttataccaaaaaaaatta
aagactaataatgcattagattttgatgatttgatatataaaactgtggagttatttaaa
acaaataaagatgtattagaattttaccaaagaaaatttaaatatataatggtggatgaa
tatcaagatactaataaatctcaatatgaattagttaaattattagctttagttcataga
aatatgtgtgtagttggtgatgatgatcaatgtatatatgaatggagaggggcagatata
agcaatatattaaattttgagaaggattataaagaagctaaggttataaaattagagcaa
aattataggtcaaagggtaatatattaaatgctgctaatgaggttataaaaaataattct
caaagaaaaaataaagttttaagaactgaaaatgaaaatggaaacaagataaaagtattt
agagcatattctgatatagatgaagcaaaatttgtagcttccgaaatcaaaaaaataata
aaggatagtgaaagatcttttaatgattttgcagttttatatagaactaacgcccaatcc
cgtatttttgaagatgtgtttatgaaaagagatatcccttatagattaataggtggatta
aagttttatgatagaaaagaaataaaggatttaatggcttatttaaagcttataaacaat
ccattagatgatataagtttaaggagaataataaatgttcctaaaaggagtataggtgat
gctacagtaaaaaaagttcaagaatttgcaaatgaaatggatgaatgtatgtatagcgtg
cttttagatgcggatcaaatattaacattgtctcaaagaagtataacatctatcaaaaag
ttcgtaagtataatgaatagctttataagaaaaaaagatgagataagcgtatctgctctt
ataaaagaaatattagaagaaacaggatacttaaaagaattaaaaaattctaagaatcca
gatgatgtaagtagagtagaaaatctgaaagaattagtttccgcagcagcagattttgaa
agagaatcagaagataaatctttaggagcgtttttagaaaaagtagcattggttacagat
atagataattatgatgaaaattcagatagtgttgctatgatgacagtacatagtgctaag
ggattagaatttcctgtagtatttatggtaggtatggaaaatggaatatttccaggaaca
caatcattgtcagatccaaaagaaatggaagagtctagaagactgtgttatgttgctata
acaagagcaaaagaacagttatatataacttcagcagaaattagaaaagtatttggaaga
accgtagcctatgctttatcagattttgtaagtgagatatccaaagatttaaaagataac
gtaaatattactggagaagtagcaactgataaagtattgcataaaaattttggtataaga
tcacaaaaaacaaatagtattaattcttataaatcacctagcttaaataatatacctaaa
aataatgtggattctaataagcttaatgtaggtttaaaggttaagcataaagattttgga
ataggaactatagttagtatgagtaaggtttcggatgacataaagttaactattgctttt
gaccgtagaggtgttaaaatattaatgcttagtatggcgccaattgaagcggtttag
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